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  5. Lsat_1_v5_gn_4_50801.1

Lsat_1_v5_gn_4_50801.1 (ATPI)


Aliases : ATPI

Description : component *(PsbJ) of PS-II complex


Gene families : OG0017039 (OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Lactuca sativa (Lsa) PCC: Lsat_1_v5_gn_4_50801.1
Cluster Lactuca sativa (Lsa) Coexpression Clusters (HCCA Algorithm): Cluster_13

Target Alias Description ECC score Gene Family Method Actions
Mp4g04010.1 ATPI subunit a of membrane CF0 subcomplex of ATP synthase complex 0.01 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol

Type GO Term Name Evidence Source
CC GO:0009523 photosystem II IEA Interproscan
CC GO:0009539 photosystem II reaction center IEA Interproscan
BP GO:0015979 photosynthesis IEA Interproscan
CC GO:0016020 membrane IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0000287 magnesium ion binding IEP Lactuca Sativa GO terms from Neighborhoods
MF GO:0003735 structural constituent of ribosome IEP Lactuca Sativa GO terms from Neighborhoods
MF GO:0004176 ATP-dependent peptidase activity IEP Lactuca Sativa GO terms from Neighborhoods
MF GO:0005198 structural molecule activity IEP Lactuca Sativa GO terms from Neighborhoods
MF GO:0005524 ATP binding IEP Lactuca Sativa GO terms from Neighborhoods
CC GO:0005840 ribosome IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0006091 generation of precursor metabolites and energy IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0006139 nucleobase-containing compound metabolic process IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0006163 purine nucleotide metabolic process IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0006164 purine nucleotide biosynthetic process IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0006412 translation IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0006518 peptide metabolic process IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0006725 cellular aromatic compound metabolic process IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0006753 nucleoside phosphate metabolic process IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0006754 ATP biosynthetic process IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0006793 phosphorus metabolic process IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0006796 phosphate-containing compound metabolic process IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0006807 nitrogen compound metabolic process IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0006810 transport IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0006811 monoatomic ion transport IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0006812 monoatomic cation transport IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0009058 biosynthetic process IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0009059 macromolecule biosynthetic process IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0009117 nucleotide metabolic process IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0009141 nucleoside triphosphate metabolic process IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0009142 nucleoside triphosphate biosynthetic process IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0009144 purine nucleoside triphosphate metabolic process IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0009145 purine nucleoside triphosphate biosynthetic process IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0009150 purine ribonucleotide metabolic process IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0009152 purine ribonucleotide biosynthetic process IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0009165 nucleotide biosynthetic process IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0009199 ribonucleoside triphosphate metabolic process IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0009201 ribonucleoside triphosphate biosynthetic process IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0009205 purine ribonucleoside triphosphate metabolic process IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0009206 purine ribonucleoside triphosphate biosynthetic process IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0009259 ribonucleotide metabolic process IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0009260 ribonucleotide biosynthetic process IEP Lactuca Sativa GO terms from Neighborhoods
CC GO:0009512 cytochrome b6f complex IEP Lactuca Sativa GO terms from Neighborhoods
CC GO:0009522 photosystem I IEP Lactuca Sativa GO terms from Neighborhoods
CC GO:0009538 photosystem I reaction center IEP Lactuca Sativa GO terms from Neighborhoods
CC GO:0009579 thylakoid IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0009767 photosynthetic electron transport chain IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0009772 photosynthetic electron transport in photosystem II IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0015977 carbon fixation IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0015986 proton motive force-driven ATP synthesis IEP Lactuca Sativa GO terms from Neighborhoods
MF GO:0016168 chlorophyll binding IEP Lactuca Sativa GO terms from Neighborhoods
MF GO:0016829 lyase activity IEP Lactuca Sativa GO terms from Neighborhoods
MF GO:0016830 carbon-carbon lyase activity IEP Lactuca Sativa GO terms from Neighborhoods
MF GO:0016831 carboxy-lyase activity IEP Lactuca Sativa GO terms from Neighborhoods
MF GO:0016984 ribulose-bisphosphate carboxylase activity IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0019637 organophosphate metabolic process IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0019684 photosynthesis, light reaction IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0019693 ribose phosphate metabolic process IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0022900 electron transport chain IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0034220 monoatomic ion transmembrane transport IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0034641 cellular nitrogen compound metabolic process IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0034654 nucleobase-containing compound biosynthetic process IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0043043 peptide biosynthetic process IEP Lactuca Sativa GO terms from Neighborhoods
CC GO:0043226 organelle IEP Lactuca Sativa GO terms from Neighborhoods
CC GO:0043228 non-membrane-bounded organelle IEP Lactuca Sativa GO terms from Neighborhoods
CC GO:0043229 intracellular organelle IEP Lactuca Sativa GO terms from Neighborhoods
CC GO:0043232 intracellular non-membrane-bounded organelle IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0043603 amide metabolic process IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0043604 amide biosynthetic process IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0044238 primary metabolic process IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0044249 cellular biosynthetic process IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0044271 cellular nitrogen compound biosynthetic process IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0044281 small molecule metabolic process IEP Lactuca Sativa GO terms from Neighborhoods
MF GO:0045156 electron transporter, transferring electrons within the cyclic electron transport pathway of photosynthesis activity IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0046034 ATP metabolic process IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0046390 ribose phosphate biosynthetic process IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0046483 heterocycle metabolic process IEP Lactuca Sativa GO terms from Neighborhoods
MF GO:0046906 tetrapyrrole binding IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0051179 localization IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0051234 establishment of localization IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0055085 transmembrane transport IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0055086 nucleobase-containing small molecule metabolic process IEP Lactuca Sativa GO terms from Neighborhoods
CC GO:0070069 cytochrome complex IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0071704 organic substance metabolic process IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0072521 purine-containing compound metabolic process IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0072522 purine-containing compound biosynthetic process IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0090407 organophosphate biosynthetic process IEP Lactuca Sativa GO terms from Neighborhoods
MF GO:0097159 organic cyclic compound binding IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0098655 monoatomic cation transmembrane transport IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0098660 inorganic ion transmembrane transport IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0098662 inorganic cation transmembrane transport IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:1901135 carbohydrate derivative metabolic process IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:1901137 carbohydrate derivative biosynthetic process IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:1901293 nucleoside phosphate biosynthetic process IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:1901360 organic cyclic compound metabolic process IEP Lactuca Sativa GO terms from Neighborhoods
MF GO:1901363 heterocyclic compound binding IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:1901564 organonitrogen compound metabolic process IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:1901566 organonitrogen compound biosynthetic process IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:1901576 organic substance biosynthetic process IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:1902600 proton transmembrane transport IEP Lactuca Sativa GO terms from Neighborhoods
InterPro domains Description Start Stop
IPR002682 PSII_PsbJ 143 180
No external refs found!