Lsat_1_v5_gn_4_48361.1 (AT-HSFA4A, HSF A4A)

Aliases : AT-HSFA4A, HSF A4A

Description : HSF-type transcription factor

Gene families : OG0003373 (OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol) Phylogenetic Tree(s): OG0003373_tree

Sequence : coding (download), protein (download)

Attention: This gene has low abundance.

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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	Lactuca sativa (Lsa) PCC: Lsat_1_v5_gn_4_48361.1
Cluster	Lactuca sativa (Lsa) Coexpression Clusters (HCCA Algorithm): Cluster_18

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003676	nucleic acid binding	None	Extended
MF	GO:0003677	DNA binding	None	Extended
MF	GO:0003700	DNA-binding transcription factor activity	IEA	Interproscan
MF	GO:0005488	binding	None	Extended
BP	GO:0006355	regulation of DNA-templated transcription	IEA	Interproscan
BP	GO:0008150	biological_process	None	Extended
BP	GO:0009889	regulation of biosynthetic process	None	Extended
BP	GO:0010468	regulation of gene expression	None	Extended
BP	GO:0010556	regulation of macromolecule biosynthetic process	None	Extended
BP	GO:0019219	regulation of nucleobase-containing compound metabolic process	None	Extended
BP	GO:0019222	regulation of metabolic process	None	Extended
BP	GO:0031323	regulation of cellular metabolic process	None	Extended
BP	GO:0031326	regulation of cellular biosynthetic process	None	Extended
MF	GO:0043565	sequence-specific DNA binding	IEA	Interproscan
BP	GO:0050789	regulation of biological process	None	Extended
BP	GO:0050794	regulation of cellular process	None	Extended
BP	GO:0051171	regulation of nitrogen compound metabolic process	None	Extended
BP	GO:0051252	regulation of RNA metabolic process	None	Extended
BP	GO:0060255	regulation of macromolecule metabolic process	None	Extended
BP	GO:0065007	biological regulation	None	Extended
BP	GO:0080090	regulation of primary metabolic process	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:0140110	transcription regulator activity	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended
BP	GO:2001141	regulation of RNA biosynthetic process	None	Extended

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Type	GO Term	Name	Evidence	Source
BP	GO:0000096	sulfur amino acid metabolic process	IEP	Lactuca Sativa GO terms from Neighborhoods
MF	GO:0004332	fructose-bisphosphate aldolase activity	IEP	Lactuca Sativa GO terms from Neighborhoods
CC	GO:0005839	proteasome core complex	IEP	Lactuca Sativa GO terms from Neighborhoods
BP	GO:0006082	organic acid metabolic process	IEP	Lactuca Sativa GO terms from Neighborhoods
BP	GO:0006090	pyruvate metabolic process	IEP	Lactuca Sativa GO terms from Neighborhoods
BP	GO:0006096	glycolytic process	IEP	Lactuca Sativa GO terms from Neighborhoods
BP	GO:0006534	cysteine metabolic process	IEP	Lactuca Sativa GO terms from Neighborhoods
BP	GO:0006790	sulfur compound metabolic process	IEP	Lactuca Sativa GO terms from Neighborhoods
BP	GO:0009069	serine family amino acid metabolic process	IEP	Lactuca Sativa GO terms from Neighborhoods
BP	GO:0009092	homoserine metabolic process	IEP	Lactuca Sativa GO terms from Neighborhoods
BP	GO:0016052	carbohydrate catabolic process	IEP	Lactuca Sativa GO terms from Neighborhoods
MF	GO:0016830	carbon-carbon lyase activity	IEP	Lactuca Sativa GO terms from Neighborhoods
MF	GO:0016832	aldehyde-lyase activity	IEP	Lactuca Sativa GO terms from Neighborhoods
BP	GO:0019346	transsulfuration	IEP	Lactuca Sativa GO terms from Neighborhoods
BP	GO:0019752	carboxylic acid metabolic process	IEP	Lactuca Sativa GO terms from Neighborhoods
BP	GO:0043436	oxoacid metabolic process	IEP	Lactuca Sativa GO terms from Neighborhoods
BP	GO:0050667	homocysteine metabolic process	IEP	Lactuca Sativa GO terms from Neighborhoods
BP	GO:1901605	alpha-amino acid metabolic process	IEP	Lactuca Sativa GO terms from Neighborhoods

InterPro domains	Description	Start	Stop
IPR000232	HSF_DNA-bd	14	103

External Links

No external refs found!

Lsat_1_v5_gn_4_48361.1 (AT-HSFA4A, HSF A4A)

Expression Profile

Co-expression Networks

Functional Annotation