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  5. Lsat_1_v5_gn_4_40041.1

Lsat_1_v5_gn_4_40041.1 (APUM4, PUM4)


Aliases : APUM4, PUM4

Description : not classified


Gene families : OG0000292 (OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol) Phylogenetic Tree(s): OG0000292_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Lactuca sativa (Lsa) PCC: Lsat_1_v5_gn_4_40041.1
Cluster Lactuca sativa (Lsa) Coexpression Clusters (HCCA Algorithm): Cluster_39


Type GO Term Name Evidence Source
MF GO:0003723 RNA binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0004177 aminopeptidase activity IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0006497 protein lipidation IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0006505 GPI anchor metabolic process IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0006506 GPI anchor biosynthetic process IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0006643 membrane lipid metabolic process IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0006650 glycerophospholipid metabolic process IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0006661 phosphatidylinositol biosynthetic process IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0006664 glycolipid metabolic process IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0006810 transport IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0008104 protein localization IEP Lactuca Sativa GO terms from Neighborhoods
MF GO:0008235 metalloexopeptidase activity IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0009247 glycolipid biosynthetic process IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0015031 protein transport IEP Lactuca Sativa GO terms from Neighborhoods
MF GO:0015267 channel activity IEP Lactuca Sativa GO terms from Neighborhoods
MF GO:0022803 passive transmembrane transporter activity IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0033036 macromolecule localization IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0045017 glycerolipid biosynthetic process IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0045184 establishment of protein localization IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0046467 membrane lipid biosynthetic process IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0046474 glycerophospholipid biosynthetic process IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0046488 phosphatidylinositol metabolic process IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0051179 localization IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0051234 establishment of localization IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0051641 cellular localization IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0055085 transmembrane transport IEP Lactuca Sativa GO terms from Neighborhoods
MF GO:0070006 metalloaminopeptidase activity IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0070727 cellular macromolecule localization IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0071702 organic substance transport IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0071705 nitrogen compound transport IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:1903509 liposaccharide metabolic process IEP Lactuca Sativa GO terms from Neighborhoods
InterPro domains Description Start Stop
IPR012940 NABP 107 285
IPR001313 Pumilio_RNA-bd_rpt 328 356
IPR001313 Pumilio_RNA-bd_rpt 290 323
IPR001313 Pumilio_RNA-bd_rpt 405 428
IPR001313 Pumilio_RNA-bd_rpt 362 395
IPR001313 Pumilio_RNA-bd_rpt 434 457
No external refs found!