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Bra000568 (TPS10)


Aliases : TPS10

Description : EC_4.2 carbon-oxygen lyase. mono-/sesquiterpene-/diterpene synthase


Gene families : OG0004615 (OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol) Phylogenetic Tree(s): OG0004615_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Brassica rapa (Bra) PCC: Bra000568
Cluster Brassica rapa (Bra) Coexpression Clusters (HCCA Algorithm): Cluster_154

Target Alias Description ECC score Gene Family Method Actions
Bra000727 TPS10 mono-/sesquiterpene-/diterpene synthase. EC_4.2... 0.04 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol

Type GO Term Name Evidence Source
MF GO:0000287 magnesium ion binding IEA Interproscan
MF GO:0010333 terpene synthase activity IEA Interproscan
MF GO:0016829 lyase activity IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003723 RNA binding IEP Brassica rapa GO terms from Neighborhoods
MF GO:0004519 endonuclease activity IEP Brassica rapa GO terms from Neighborhoods
MF GO:0004521 RNA endonuclease activity IEP Brassica rapa GO terms from Neighborhoods
MF GO:0004540 RNA nuclease activity IEP Brassica rapa GO terms from Neighborhoods
MF GO:0015299 obsolete solute:proton antiporter activity IEP Brassica rapa GO terms from Neighborhoods
MF GO:0016849 phosphorus-oxygen lyase activity IEP Brassica rapa GO terms from Neighborhoods
MF GO:0019842 vitamin binding IEP Brassica rapa GO terms from Neighborhoods
MF GO:0030170 pyridoxal phosphate binding IEP Brassica rapa GO terms from Neighborhoods
MF GO:0033897 ribonuclease T2 activity IEP Brassica rapa GO terms from Neighborhoods
MF GO:0070279 vitamin B6 binding IEP Brassica rapa GO terms from Neighborhoods
InterPro domains Description Start Stop
IPR005630 Terpene_synthase_metal-bd 269 533
IPR001906 Terpene_synth_N 56 237
No external refs found!