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  5. Lsat_1_v5_gn_4_27120.1

Lsat_1_v5_gn_4_27120.1 (FRG2, CHR28)


Aliases : FRG2, CHR28

Description : chromatin remodeling factor *(Ris1). chromatin remodeling factor *(Rad5)


Gene families : OG0005074 (OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol) Phylogenetic Tree(s): OG0005074_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Lactuca sativa (Lsa) PCC: Lsat_1_v5_gn_4_27120.1
Cluster Lactuca sativa (Lsa) Coexpression Clusters (HCCA Algorithm): Cluster_172


Type GO Term Name Evidence Source
MF GO:0005524 ATP binding IEA Interproscan
MF GO:0140658 ATP-dependent chromatin remodeler activity IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003774 cytoskeletal motor activity IEP Lactuca Sativa GO terms from Neighborhoods
MF GO:0004402 histone acetyltransferase activity IEP Lactuca Sativa GO terms from Neighborhoods
MF GO:0004518 nuclease activity IEP Lactuca Sativa GO terms from Neighborhoods
MF GO:0004540 RNA nuclease activity IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0006473 protein acetylation IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0006475 internal protein amino acid acetylation IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0006743 ubiquinone metabolic process IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0006744 ubiquinone biosynthetic process IEP Lactuca Sativa GO terms from Neighborhoods
MF GO:0008080 N-acetyltransferase activity IEP Lactuca Sativa GO terms from Neighborhoods
MF GO:0016407 acetyltransferase activity IEP Lactuca Sativa GO terms from Neighborhoods
MF GO:0016410 N-acyltransferase activity IEP Lactuca Sativa GO terms from Neighborhoods
CC GO:0016459 myosin complex IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0016570 histone modification IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0016573 histone acetylation IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0018193 peptidyl-amino acid modification IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0018205 peptidyl-lysine modification IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0018393 internal peptidyl-lysine acetylation IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0018394 peptidyl-lysine acetylation IEP Lactuca Sativa GO terms from Neighborhoods
MF GO:0034212 peptide N-acetyltransferase activity IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0042180 cellular ketone metabolic process IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0042181 ketone biosynthetic process IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0043543 protein acylation IEP Lactuca Sativa GO terms from Neighborhoods
MF GO:0061733 peptide-lysine-N-acetyltransferase activity IEP Lactuca Sativa GO terms from Neighborhoods
MF GO:0140993 histone modifying activity IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:1901661 quinone metabolic process IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:1901663 quinone biosynthetic process IEP Lactuca Sativa GO terms from Neighborhoods
InterPro domains Description Start Stop
IPR000330 SNF2_N 219 602
IPR001650 Helicase_C 726 839
No external refs found!