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  5. Lsat_1_v5_gn_4_25801.1

Lsat_1_v5_gn_4_25801.1 (DYW1)


Aliases : DYW1

Description : not classified


Gene families : OG0008607 (OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Lactuca sativa (Lsa) PCC: Lsat_1_v5_gn_4_25801.1
Cluster Lactuca sativa (Lsa) Coexpression Clusters (HCCA Algorithm): Cluster_123


Type GO Term Name Evidence Source
MF GO:0008270 zinc ion binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0005543 phospholipid binding IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0008152 metabolic process IEP Lactuca Sativa GO terms from Neighborhoods
MF GO:0008289 lipid binding IEP Lactuca Sativa GO terms from Neighborhoods
MF GO:0016829 lyase activity IEP Lactuca Sativa GO terms from Neighborhoods
MF GO:0016840 carbon-nitrogen lyase activity IEP Lactuca Sativa GO terms from Neighborhoods
MF GO:0016843 amine-lyase activity IEP Lactuca Sativa GO terms from Neighborhoods
MF GO:0016844 strictosidine synthase activity IEP Lactuca Sativa GO terms from Neighborhoods
MF GO:0035091 phosphatidylinositol binding IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0044237 cellular metabolic process IEP Lactuca Sativa GO terms from Neighborhoods
InterPro domains Description Start Stop
IPR032867 DYW_dom 519 611
IPR002885 Pentatricopeptide_rpt 278 304
IPR002885 Pentatricopeptide_rpt 378 401
IPR002885 Pentatricopeptide_rpt 177 200
IPR002885 Pentatricopeptide_rpt 342 367
IPR002885 Pentatricopeptide_rpt 307 336
IPR046848 E_motif 421 483
IPR002885 Pentatricopeptide_rpt 105 149
IPR002885 Pentatricopeptide_rpt 203 250
No external refs found!