Lsat_1_v5_gn_4_20701.1

Description : not classified

Gene families : OG0037006 (OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)

Attention: This gene has low abundance.

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	Lactuca sativa (Lsa) PCC: Lsat_1_v5_gn_4_20701.1
Cluster	Lactuca sativa (Lsa) Coexpression Clusters (HCCA Algorithm): Cluster_104

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0005488	binding	None	Extended
MF	GO:0008270	zinc ion binding	IEA	Interproscan
MF	GO:0043167	ion binding	None	Extended
MF	GO:0043169	cation binding	None	Extended
MF	GO:0046872	metal ion binding	None	Extended
MF	GO:0046914	transition metal ion binding	None	Extended

Type	GO Term	Name	Evidence	Source
CC	GO:0005839	proteasome core complex	IEP	Lactuca Sativa GO terms from Neighborhoods

InterPro domains	Description	Start	Stop
IPR032867	DYW_dom	653	745
IPR002885	Pentatricopeptide_rpt	104	133
IPR002885	Pentatricopeptide_rpt	73	101
IPR002885	Pentatricopeptide_rpt	512	536
IPR002885	Pentatricopeptide_rpt	207	230
IPR046848	E_motif	555	617
IPR002885	Pentatricopeptide_rpt	235	282
IPR002885	Pentatricopeptide_rpt	336	383
IPR002885	Pentatricopeptide_rpt	437	485

External Links

No external refs found!