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  5. Lsat_1_v5_gn_4_183800.1

Lsat_1_v5_gn_4_183800.1


Description : not classified


Gene families : OG0037427 (OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Lactuca sativa (Lsa) PCC: Lsat_1_v5_gn_4_183800.1
Cluster Lactuca sativa (Lsa) Coexpression Clusters (HCCA Algorithm): Cluster_50


Type GO Term Name Evidence Source
MF GO:0046872 metal ion binding IEA Interproscan
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Type GO Term Name Evidence Source
CC GO:0000775 chromosome, centromeric region IEP Lactuca Sativa GO terms from Neighborhoods
CC GO:0000786 nucleosome IEP Lactuca Sativa GO terms from Neighborhoods
MF GO:0003676 nucleic acid binding IEP Lactuca Sativa GO terms from Neighborhoods
MF GO:0003677 DNA binding IEP Lactuca Sativa GO terms from Neighborhoods
MF GO:0003774 cytoskeletal motor activity IEP Lactuca Sativa GO terms from Neighborhoods
MF GO:0003777 microtubule motor activity IEP Lactuca Sativa GO terms from Neighborhoods
MF GO:0005515 protein binding IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0006325 chromatin organization IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0006334 nucleosome assembly IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0006338 chromatin remodeling IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0007017 microtubule-based process IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0007018 microtubule-based movement IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0007059 chromosome segregation IEP Lactuca Sativa GO terms from Neighborhoods
MF GO:0008017 microtubule binding IEP Lactuca Sativa GO terms from Neighborhoods
MF GO:0008092 cytoskeletal protein binding IEP Lactuca Sativa GO terms from Neighborhoods
MF GO:0015631 tubulin binding IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0022402 cell cycle process IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0022414 reproductive process IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0022607 cellular component assembly IEP Lactuca Sativa GO terms from Neighborhoods
CC GO:0032993 protein-DNA complex IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0034728 nucleosome organization IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0043933 protein-containing complex organization IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0045132 meiotic chromosome segregation IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0065003 protein-containing complex assembly IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0065004 protein-DNA complex assembly IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0071824 protein-DNA complex organization IEP Lactuca Sativa GO terms from Neighborhoods
MF GO:0097159 organic cyclic compound binding IEP Lactuca Sativa GO terms from Neighborhoods
CC GO:0098687 chromosomal region IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0098813 nuclear chromosome segregation IEP Lactuca Sativa GO terms from Neighborhoods
MF GO:0140657 ATP-dependent activity IEP Lactuca Sativa GO terms from Neighborhoods
MF GO:1901363 heterocyclic compound binding IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:1903046 meiotic cell cycle process IEP Lactuca Sativa GO terms from Neighborhoods
InterPro domains Description Start Stop
IPR018957 Znf_C3HC4_RING-type 147 185
No external refs found!