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  5. Lsat_1_v5_gn_4_175961.1

Lsat_1_v5_gn_4_175961.1


Description : TCP-type transcription factor


Gene families : OG0037069 (OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Lactuca sativa (Lsa) PCC: Lsat_1_v5_gn_4_175961.1
Cluster Lactuca sativa (Lsa) Coexpression Clusters (HCCA Algorithm): Cluster_158


Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0000154 rRNA modification IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0001510 RNA methylation IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0006835 dicarboxylic acid transport IEP Lactuca Sativa GO terms from Neighborhoods
MF GO:0008168 methyltransferase activity IEP Lactuca Sativa GO terms from Neighborhoods
MF GO:0008170 N-methyltransferase activity IEP Lactuca Sativa GO terms from Neighborhoods
MF GO:0008649 rRNA methyltransferase activity IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0015740 C4-dicarboxylate transport IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0015743 malate transport IEP Lactuca Sativa GO terms from Neighborhoods
MF GO:0016436 rRNA (uridine) methyltransferase activity IEP Lactuca Sativa GO terms from Neighborhoods
MF GO:0016741 transferase activity, transferring one-carbon groups IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0031167 rRNA methylation IEP Lactuca Sativa GO terms from Neighborhoods
MF GO:0044183 protein folding chaperone IEP Lactuca Sativa GO terms from Neighborhoods
MF GO:0070042 rRNA (uridine-N3-)-methyltransferase activity IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0070475 rRNA base methylation IEP Lactuca Sativa GO terms from Neighborhoods
MF GO:0140102 catalytic activity, acting on a rRNA IEP Lactuca Sativa GO terms from Neighborhoods
MF GO:0140662 ATP-dependent protein folding chaperone IEP Lactuca Sativa GO terms from Neighborhoods
InterPro domains Description Start Stop
IPR017887 TF_TCP_subgr 95 231
No external refs found!