Bra005594 (RRP6L3, AtRRP6L3)

Aliases : RRP6L3, AtRRP6L3

Description : exoribonuclease *(RRP6L)

Gene families : OG0010842 (OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)

Attention: This gene has low abundance.

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	Brassica rapa (Bra) PCC: Bra005594
Cluster	Brassica rapa (Bra) Coexpression Clusters (HCCA Algorithm): Cluster_19

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003676	nucleic acid binding	IEA	Interproscan
MF	GO:0003824	catalytic activity	None	Extended
MF	GO:0004518	nuclease activity	None	Extended
MF	GO:0004527	exonuclease activity	None	Extended
MF	GO:0005488	binding	None	Extended
BP	GO:0006139	nucleobase-containing compound metabolic process	IEA	Interproscan
BP	GO:0006725	cellular aromatic compound metabolic process	None	Extended
BP	GO:0006807	nitrogen compound metabolic process	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
MF	GO:0008408	3'-5' exonuclease activity	IEA	Interproscan
BP	GO:0009987	cellular process	None	Extended
MF	GO:0016787	hydrolase activity	None	Extended
MF	GO:0016788	hydrolase activity, acting on ester bonds	None	Extended
BP	GO:0034641	cellular nitrogen compound metabolic process	None	Extended
BP	GO:0044237	cellular metabolic process	None	Extended
BP	GO:0044238	primary metabolic process	None	Extended
BP	GO:0046483	heterocycle metabolic process	None	Extended
BP	GO:0071704	organic substance metabolic process	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
BP	GO:1901360	organic cyclic compound metabolic process	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended

Type	GO Term	Name	Evidence	Source
BP	GO:0006351	DNA-templated transcription	IEP	Brassica rapa GO terms from Neighborhoods
BP	GO:0018130	heterocycle biosynthetic process	IEP	Brassica rapa GO terms from Neighborhoods
BP	GO:0019438	aromatic compound biosynthetic process	IEP	Brassica rapa GO terms from Neighborhoods
BP	GO:0032774	RNA biosynthetic process	IEP	Brassica rapa GO terms from Neighborhoods
BP	GO:0034654	nucleobase-containing compound biosynthetic process	IEP	Brassica rapa GO terms from Neighborhoods
BP	GO:1901362	organic cyclic compound biosynthetic process	IEP	Brassica rapa GO terms from Neighborhoods

InterPro domains	Description	Start	Stop
IPR002121	HRDC_dom	399	443
IPR002562	3'-5'_exonuclease_dom	188	355

External Links

No external refs found!