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  5. Lsat_1_v5_gn_4_148300.1

Lsat_1_v5_gn_4_148300.1 (ATAMPD, FAC1)


Aliases : ATAMPD, FAC1

Description : not classified


Gene families : OG0001016 (OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol) Phylogenetic Tree(s): OG0001016_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Lactuca sativa (Lsa) PCC: Lsat_1_v5_gn_4_148300.1
Cluster Lactuca sativa (Lsa) Coexpression Clusters (HCCA Algorithm): Cluster_86

Target Alias Description ECC score Gene Family Method Actions
Lsat_1_v5_gn_9_46440.1 ATAMPD, FAC1 membrane-associated AMP deaminase *(FAC1). EC_3.5... 0.03 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003697 single-stranded DNA binding IEP Lactuca Sativa GO terms from Neighborhoods
MF GO:0003950 NAD+ ADP-ribosyltransferase activity IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0006099 tricarboxylic acid cycle IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0006508 proteolysis IEP Lactuca Sativa GO terms from Neighborhoods
MF GO:0008233 peptidase activity IEP Lactuca Sativa GO terms from Neighborhoods
MF GO:0008234 cysteine-type peptidase activity IEP Lactuca Sativa GO terms from Neighborhoods
MF GO:0015095 magnesium ion transmembrane transporter activity IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0015693 magnesium ion transport IEP Lactuca Sativa GO terms from Neighborhoods
MF GO:0016763 pentosyltransferase activity IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0030163 protein catabolic process IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0032012 regulation of ARF protein signal transduction IEP Lactuca Sativa GO terms from Neighborhoods
CC GO:0045273 respiratory chain complex II IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0046578 regulation of Ras protein signal transduction IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0051056 regulation of small GTPase mediated signal transduction IEP Lactuca Sativa GO terms from Neighborhoods
MF GO:0051539 4 iron, 4 sulfur cluster binding IEP Lactuca Sativa GO terms from Neighborhoods
CC GO:0098803 respiratory chain complex IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:1902531 regulation of intracellular signal transduction IEP Lactuca Sativa GO terms from Neighborhoods

No InterPro domains available for this sequence

No external refs found!