Lsat_1_v5_gn_4_148140.1

Description : effector receptor *(NLR)

Gene families : OG0000032 (OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol) Phylogenetic Tree(s): OG0000032_tree

Sequence : coding (download), protein (download)

Attention: This gene has low abundance.

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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	Lactuca sativa (Lsa) PCC: Lsat_1_v5_gn_4_148140.1
Cluster	Lactuca sativa (Lsa) Coexpression Clusters (HCCA Algorithm): Cluster_186

Target	Alias	Description	ECC score	Gene Family Method
Lsat_1_v5_gn_4_144921.1	BAR1	effector receptor *(NLR)	0.03	OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol
Lsat_1_v5_gn_4_147380.1	TN9	effector receptor *(NLR)	0.03	OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol
Lsat_1_v5_gn_5_38001.1	DM10	effector receptor *(NLR)	0.03	OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol
Lsat_1_v5_gn_5_39440.1	RLM3, TN16	effector receptor *(NLR)	0.05	OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol
Lsat_1_v5_gn_6_74641.1	No alias	effector receptor *(NLR)	0.05	OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol
Lsat_1_v5_gn_9_90700.1	TN11	effector receptor *(NLR)	0.03	OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol
Lsat_1_v5_gn_9_91281.1	TN10, AtTN10, TIR	effector receptor *(NLR)	0.04	OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol
Lsat_1_v5_gn_9_91880.1	No alias	effector receptor *(NLR)	0.03	OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol
Lsat_1_v5_gn_9_92681.1	No alias	effector receptor *(NLR)	0.05	OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol

Type	GO Term	Name	Evidence	Source
MF	GO:0000166	nucleotide binding	None	Extended
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0005488	binding	None	Extended
MF	GO:0005515	protein binding	IEA	Interproscan
BP	GO:0007165	signal transduction	IEA	Interproscan
BP	GO:0008150	biological_process	None	Extended
BP	GO:0009987	cellular process	None	Extended
MF	GO:0017076	purine nucleotide binding	None	Extended
MF	GO:0030554	adenyl nucleotide binding	None	Extended
MF	GO:0032553	ribonucleotide binding	None	Extended
MF	GO:0032555	purine ribonucleotide binding	None	Extended
MF	GO:0032559	adenyl ribonucleotide binding	None	Extended
MF	GO:0036094	small molecule binding	None	Extended
MF	GO:0043167	ion binding	None	Extended
MF	GO:0043168	anion binding	None	Extended
MF	GO:0043531	ADP binding	IEA	Interproscan
BP	GO:0050789	regulation of biological process	None	Extended
BP	GO:0050794	regulation of cellular process	None	Extended
BP	GO:0065007	biological regulation	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:0097367	carbohydrate derivative binding	None	Extended
MF	GO:1901265	nucleoside phosphate binding	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended

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Type	GO Term	Name	Evidence	Source
MF	GO:0000155	phosphorelay sensor kinase activity	IEP	Lactuca Sativa GO terms from Neighborhoods
BP	GO:0000160	phosphorelay signal transduction system	IEP	Lactuca Sativa GO terms from Neighborhoods
MF	GO:0004673	protein histidine kinase activity	IEP	Lactuca Sativa GO terms from Neighborhoods
CC	GO:0005777	peroxisome	IEP	Lactuca Sativa GO terms from Neighborhoods
BP	GO:0006801	superoxide metabolic process	IEP	Lactuca Sativa GO terms from Neighborhoods
BP	GO:0006996	organelle organization	IEP	Lactuca Sativa GO terms from Neighborhoods
BP	GO:0007031	peroxisome organization	IEP	Lactuca Sativa GO terms from Neighborhoods
MF	GO:0016301	kinase activity	IEP	Lactuca Sativa GO terms from Neighborhoods
BP	GO:0016567	protein ubiquitination	IEP	Lactuca Sativa GO terms from Neighborhoods
MF	GO:0016740	transferase activity	IEP	Lactuca Sativa GO terms from Neighborhoods
MF	GO:0016772	transferase activity, transferring phosphorus-containing groups	IEP	Lactuca Sativa GO terms from Neighborhoods
MF	GO:0016775	phosphotransferase activity, nitrogenous group as acceptor	IEP	Lactuca Sativa GO terms from Neighborhoods
BP	GO:0032446	protein modification by small protein conjugation	IEP	Lactuca Sativa GO terms from Neighborhoods
BP	GO:0035556	intracellular signal transduction	IEP	Lactuca Sativa GO terms from Neighborhoods
CC	GO:0042579	microbody	IEP	Lactuca Sativa GO terms from Neighborhoods
CC	GO:0043226	organelle	IEP	Lactuca Sativa GO terms from Neighborhoods
CC	GO:0043227	membrane-bounded organelle	IEP	Lactuca Sativa GO terms from Neighborhoods
CC	GO:0043229	intracellular organelle	IEP	Lactuca Sativa GO terms from Neighborhoods
CC	GO:0043231	intracellular membrane-bounded organelle	IEP	Lactuca Sativa GO terms from Neighborhoods
BP	GO:0072593	reactive oxygen species metabolic process	IEP	Lactuca Sativa GO terms from Neighborhoods
MF	GO:0140096	catalytic activity, acting on a protein	IEP	Lactuca Sativa GO terms from Neighborhoods
MF	GO:0140299	small molecule sensor activity	IEP	Lactuca Sativa GO terms from Neighborhoods

InterPro domains	Description	Start	Stop
IPR002182	NB-ARC	193	418
IPR000157	TIR_dom	14	176
IPR001611	Leu-rich_rpt	1304	1361

External Links

No external refs found!

Lsat_1_v5_gn_4_148140.1

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation