Lsat_1_v5_gn_4_141261.1 (ROCK1, TEX2)

Aliases : ROCK1, TEX2

Description : nucleotide sugar transporter *(ROCK). UDP-sugar transporter *(ROCK/TEX2)

Gene families : OG0002992 (OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol) Phylogenetic Tree(s): OG0002992_tree

Sequence : coding (download), protein (download)

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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	Lactuca sativa (Lsa) PCC: Lsat_1_v5_gn_4_141261.1
Cluster	Lactuca sativa (Lsa) Coexpression Clusters (HCCA Algorithm): Cluster_138

Type	GO Term	Name	Evidence	Source
CC	GO:0000139	Golgi membrane	IEA	Interproscan
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0005215	transporter activity	None	Extended
MF	GO:0005338	nucleotide-sugar transmembrane transporter activity	None	Extended
CC	GO:0005575	cellular_component	None	Extended
BP	GO:0006810	transport	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0009987	cellular process	None	Extended
MF	GO:0015165	pyrimidine nucleotide-sugar transmembrane transporter activity	IEA	Interproscan
BP	GO:0015780	nucleotide-sugar transmembrane transport	None	Extended
BP	GO:0015931	nucleobase-containing compound transport	None	Extended
MF	GO:0015932	nucleobase-containing compound transmembrane transporter activity	None	Extended
CC	GO:0016020	membrane	IEA	Interproscan
MF	GO:0022857	transmembrane transporter activity	None	Extended
CC	GO:0031090	organelle membrane	None	Extended
BP	GO:0051179	localization	None	Extended
BP	GO:0051234	establishment of localization	None	Extended
BP	GO:0055085	transmembrane transport	None	Extended
BP	GO:0071702	organic substance transport	None	Extended
BP	GO:0071705	nitrogen compound transport	None	Extended
BP	GO:0090481	pyrimidine nucleotide-sugar transmembrane transport	IEA	Interproscan
CC	GO:0098588	bounding membrane of organelle	None	Extended
CC	GO:0110165	cellular anatomical entity	None	Extended
BP	GO:1901264	carbohydrate derivative transport	None	Extended
MF	GO:1901505	carbohydrate derivative transmembrane transporter activity	None	Extended

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Type	GO Term	Name	Evidence	Source
BP	GO:0000375	RNA splicing, via transesterification reactions	IEP	Lactuca Sativa GO terms from Neighborhoods
BP	GO:0000377	RNA splicing, via transesterification reactions with bulged adenosine as nucleophile	IEP	Lactuca Sativa GO terms from Neighborhoods
BP	GO:0000398	mRNA splicing, via spliceosome	IEP	Lactuca Sativa GO terms from Neighborhoods
MF	GO:0003854	3-beta-hydroxy-delta5-steroid dehydrogenase activity	IEP	Lactuca Sativa GO terms from Neighborhoods
MF	GO:0003872	6-phosphofructokinase activity	IEP	Lactuca Sativa GO terms from Neighborhoods
MF	GO:0004177	aminopeptidase activity	IEP	Lactuca Sativa GO terms from Neighborhoods
MF	GO:0004190	aspartic-type endopeptidase activity	IEP	Lactuca Sativa GO terms from Neighborhoods
MF	GO:0004484	mRNA guanylyltransferase activity	IEP	Lactuca Sativa GO terms from Neighborhoods
MF	GO:0004721	phosphoprotein phosphatase activity	IEP	Lactuca Sativa GO terms from Neighborhoods
MF	GO:0004842	ubiquitin-protein transferase activity	IEP	Lactuca Sativa GO terms from Neighborhoods
MF	GO:0005244	voltage-gated monoatomic ion channel activity	IEP	Lactuca Sativa GO terms from Neighborhoods
MF	GO:0005247	voltage-gated chloride channel activity	IEP	Lactuca Sativa GO terms from Neighborhoods
MF	GO:0005253	monoatomic anion channel activity	IEP	Lactuca Sativa GO terms from Neighborhoods
MF	GO:0005254	chloride channel activity	IEP	Lactuca Sativa GO terms from Neighborhoods
CC	GO:0005681	spliceosomal complex	IEP	Lactuca Sativa GO terms from Neighborhoods
BP	GO:0006139	nucleobase-containing compound metabolic process	IEP	Lactuca Sativa GO terms from Neighborhoods
BP	GO:0006352	DNA-templated transcription initiation	IEP	Lactuca Sativa GO terms from Neighborhoods
BP	GO:0006370	7-methylguanosine mRNA capping	IEP	Lactuca Sativa GO terms from Neighborhoods
BP	GO:0006396	RNA processing	IEP	Lactuca Sativa GO terms from Neighborhoods
BP	GO:0006397	mRNA processing	IEP	Lactuca Sativa GO terms from Neighborhoods
BP	GO:0006417	regulation of translation	IEP	Lactuca Sativa GO terms from Neighborhoods
BP	GO:0006448	regulation of translational elongation	IEP	Lactuca Sativa GO terms from Neighborhoods
BP	GO:0006449	regulation of translational termination	IEP	Lactuca Sativa GO terms from Neighborhoods
BP	GO:0006821	chloride transport	IEP	Lactuca Sativa GO terms from Neighborhoods
MF	GO:0008138	protein tyrosine/serine/threonine phosphatase activity	IEP	Lactuca Sativa GO terms from Neighborhoods
MF	GO:0008192	RNA guanylyltransferase activity	IEP	Lactuca Sativa GO terms from Neighborhoods
MF	GO:0008233	peptidase activity	IEP	Lactuca Sativa GO terms from Neighborhoods
MF	GO:0008308	voltage-gated monoatomic anion channel activity	IEP	Lactuca Sativa GO terms from Neighborhoods
BP	GO:0008380	RNA splicing	IEP	Lactuca Sativa GO terms from Neighborhoods
MF	GO:0008443	phosphofructokinase activity	IEP	Lactuca Sativa GO terms from Neighborhoods
MF	GO:0008509	monoatomic anion transmembrane transporter activity	IEP	Lactuca Sativa GO terms from Neighborhoods
MF	GO:0008641	ubiquitin-like modifier activating enzyme activity	IEP	Lactuca Sativa GO terms from Neighborhoods
BP	GO:0009452	7-methylguanosine RNA capping	IEP	Lactuca Sativa GO terms from Neighborhoods
BP	GO:0009891	positive regulation of biosynthetic process	IEP	Lactuca Sativa GO terms from Neighborhoods
BP	GO:0009893	positive regulation of metabolic process	IEP	Lactuca Sativa GO terms from Neighborhoods
BP	GO:0010557	positive regulation of macromolecule biosynthetic process	IEP	Lactuca Sativa GO terms from Neighborhoods
BP	GO:0010604	positive regulation of macromolecule metabolic process	IEP	Lactuca Sativa GO terms from Neighborhoods
BP	GO:0010608	post-transcriptional regulation of gene expression	IEP	Lactuca Sativa GO terms from Neighborhoods
BP	GO:0010628	positive regulation of gene expression	IEP	Lactuca Sativa GO terms from Neighborhoods
BP	GO:0010921	regulation of phosphatase activity	IEP	Lactuca Sativa GO terms from Neighborhoods
MF	GO:0015108	chloride transmembrane transporter activity	IEP	Lactuca Sativa GO terms from Neighborhoods
BP	GO:0016070	RNA metabolic process	IEP	Lactuca Sativa GO terms from Neighborhoods
BP	GO:0016071	mRNA metabolic process	IEP	Lactuca Sativa GO terms from Neighborhoods
MF	GO:0016229	steroid dehydrogenase activity	IEP	Lactuca Sativa GO terms from Neighborhoods
BP	GO:0016311	dephosphorylation	IEP	Lactuca Sativa GO terms from Neighborhoods
MF	GO:0016755	aminoacyltransferase activity	IEP	Lactuca Sativa GO terms from Neighborhoods
MF	GO:0016840	carbon-nitrogen lyase activity	IEP	Lactuca Sativa GO terms from Neighborhoods
MF	GO:0016843	amine-lyase activity	IEP	Lactuca Sativa GO terms from Neighborhoods
MF	GO:0016844	strictosidine synthase activity	IEP	Lactuca Sativa GO terms from Neighborhoods
MF	GO:0016877	ligase activity, forming carbon-sulfur bonds	IEP	Lactuca Sativa GO terms from Neighborhoods
MF	GO:0019200	carbohydrate kinase activity	IEP	Lactuca Sativa GO terms from Neighborhoods
MF	GO:0019781	NEDD8 activating enzyme activity	IEP	Lactuca Sativa GO terms from Neighborhoods
MF	GO:0019787	ubiquitin-like protein transferase activity	IEP	Lactuca Sativa GO terms from Neighborhoods
MF	GO:0019902	phosphatase binding	IEP	Lactuca Sativa GO terms from Neighborhoods
MF	GO:0019903	protein phosphatase binding	IEP	Lactuca Sativa GO terms from Neighborhoods
MF	GO:0022832	voltage-gated channel activity	IEP	Lactuca Sativa GO terms from Neighborhoods
CC	GO:0030532	small nuclear ribonucleoprotein complex	IEP	Lactuca Sativa GO terms from Neighborhoods
BP	GO:0031325	positive regulation of cellular metabolic process	IEP	Lactuca Sativa GO terms from Neighborhoods
BP	GO:0031328	positive regulation of cellular biosynthetic process	IEP	Lactuca Sativa GO terms from Neighborhoods
MF	GO:0033764	steroid dehydrogenase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor	IEP	Lactuca Sativa GO terms from Neighborhoods
BP	GO:0034248	regulation of amide metabolic process	IEP	Lactuca Sativa GO terms from Neighborhoods
BP	GO:0034250	positive regulation of amide metabolic process	IEP	Lactuca Sativa GO terms from Neighborhoods
BP	GO:0035303	regulation of dephosphorylation	IEP	Lactuca Sativa GO terms from Neighborhoods
BP	GO:0035304	regulation of protein dephosphorylation	IEP	Lactuca Sativa GO terms from Neighborhoods
BP	GO:0036260	RNA capping	IEP	Lactuca Sativa GO terms from Neighborhoods
MF	GO:0043021	ribonucleoprotein complex binding	IEP	Lactuca Sativa GO terms from Neighborhoods
MF	GO:0043022	ribosome binding	IEP	Lactuca Sativa GO terms from Neighborhoods
BP	GO:0043243	positive regulation of protein-containing complex disassembly	IEP	Lactuca Sativa GO terms from Neighborhoods
BP	GO:0043244	regulation of protein-containing complex disassembly	IEP	Lactuca Sativa GO terms from Neighborhoods
BP	GO:0043666	regulation of phosphoprotein phosphatase activity	IEP	Lactuca Sativa GO terms from Neighborhoods
BP	GO:0045116	protein neddylation	IEP	Lactuca Sativa GO terms from Neighborhoods
BP	GO:0045727	positive regulation of translation	IEP	Lactuca Sativa GO terms from Neighborhoods
BP	GO:0045901	positive regulation of translational elongation	IEP	Lactuca Sativa GO terms from Neighborhoods
BP	GO:0045905	positive regulation of translational termination	IEP	Lactuca Sativa GO terms from Neighborhoods
CC	GO:0046540	U4/U6 x U5 tri-snRNP complex	IEP	Lactuca Sativa GO terms from Neighborhoods
BP	GO:0048193	Golgi vesicle transport	IEP	Lactuca Sativa GO terms from Neighborhoods
BP	GO:0048522	positive regulation of cellular process	IEP	Lactuca Sativa GO terms from Neighborhoods
BP	GO:0051128	regulation of cellular component organization	IEP	Lactuca Sativa GO terms from Neighborhoods
BP	GO:0051130	positive regulation of cellular component organization	IEP	Lactuca Sativa GO terms from Neighborhoods
BP	GO:0051173	positive regulation of nitrogen compound metabolic process	IEP	Lactuca Sativa GO terms from Neighborhoods
BP	GO:0051246	regulation of protein metabolic process	IEP	Lactuca Sativa GO terms from Neighborhoods
BP	GO:0051247	positive regulation of protein metabolic process	IEP	Lactuca Sativa GO terms from Neighborhoods
BP	GO:0051336	regulation of hydrolase activity	IEP	Lactuca Sativa GO terms from Neighborhoods
MF	GO:0070001	aspartic-type peptidase activity	IEP	Lactuca Sativa GO terms from Neighborhoods
MF	GO:0070568	guanylyltransferase activity	IEP	Lactuca Sativa GO terms from Neighborhoods
BP	GO:0070647	protein modification by small protein conjugation or removal	IEP	Lactuca Sativa GO terms from Neighborhoods
BP	GO:0090304	nucleic acid metabolic process	IEP	Lactuca Sativa GO terms from Neighborhoods
CC	GO:0097525	spliceosomal snRNP complex	IEP	Lactuca Sativa GO terms from Neighborhoods
CC	GO:0097526	spliceosomal tri-snRNP complex	IEP	Lactuca Sativa GO terms from Neighborhoods
CC	GO:0120114	Sm-like protein family complex	IEP	Lactuca Sativa GO terms from Neighborhoods
MF	GO:0140096	catalytic activity, acting on a protein	IEP	Lactuca Sativa GO terms from Neighborhoods
CC	GO:0140513	nuclear protein-containing complex	IEP	Lactuca Sativa GO terms from Neighborhoods
BP	GO:1901360	organic cyclic compound metabolic process	IEP	Lactuca Sativa GO terms from Neighborhoods
CC	GO:1990904	ribonucleoprotein complex	IEP	Lactuca Sativa GO terms from Neighborhoods

InterPro domains	Description	Start	Stop
IPR007271	Nuc_sug_transpt	47	316

External Links

No external refs found!

Lsat_1_v5_gn_4_141261.1 (ROCK1, TEX2)

Expression Profile

Co-expression Networks

Functional Annotation