Lsat_1_v5_gn_4_138460.1 (CLS8, RNR1, DPD2, ATRNR1, R1)

Aliases : CLS8, RNR1, DPD2, ATRNR1, R1

Description : large subunit of ribonucleoside-diphosphate reductase heterodimer. EC_1.17 oxidoreductase acting on CH or CH2 group

Gene families : OG0000947 (OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol) Phylogenetic Tree(s): OG0000947_tree

Sequence : coding (download), protein (download)

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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	Lactuca sativa (Lsa) PCC: Lsat_1_v5_gn_4_138460.1
Cluster	Lactuca sativa (Lsa) Coexpression Clusters (HCCA Algorithm): Cluster_66

Type	GO Term	Name	Evidence	Source
MF	GO:0000166	nucleotide binding	None	Extended
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003824	catalytic activity	None	Extended
MF	GO:0004748	ribonucleoside-diphosphate reductase activity, thioredoxin disulfide as acceptor	IEA	Interproscan
MF	GO:0005488	binding	None	Extended
MF	GO:0005524	ATP binding	IEA	Interproscan
BP	GO:0006139	nucleobase-containing compound metabolic process	None	Extended
BP	GO:0006259	DNA metabolic process	None	Extended
BP	GO:0006260	DNA replication	IEA	Interproscan
BP	GO:0006725	cellular aromatic compound metabolic process	None	Extended
BP	GO:0006807	nitrogen compound metabolic process	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
BP	GO:0009987	cellular process	None	Extended
MF	GO:0016491	oxidoreductase activity	None	Extended
MF	GO:0016725	oxidoreductase activity, acting on CH or CH2 groups	None	Extended
MF	GO:0016728	oxidoreductase activity, acting on CH or CH2 groups, disulfide as acceptor	None	Extended
MF	GO:0017076	purine nucleotide binding	None	Extended
MF	GO:0030554	adenyl nucleotide binding	None	Extended
MF	GO:0032553	ribonucleotide binding	None	Extended
MF	GO:0032555	purine ribonucleotide binding	None	Extended
MF	GO:0032559	adenyl ribonucleotide binding	None	Extended
BP	GO:0034641	cellular nitrogen compound metabolic process	None	Extended
MF	GO:0035639	purine ribonucleoside triphosphate binding	None	Extended
MF	GO:0036094	small molecule binding	None	Extended
MF	GO:0043167	ion binding	None	Extended
MF	GO:0043168	anion binding	None	Extended
BP	GO:0043170	macromolecule metabolic process	None	Extended
BP	GO:0044237	cellular metabolic process	None	Extended
BP	GO:0044238	primary metabolic process	None	Extended
BP	GO:0046483	heterocycle metabolic process	None	Extended
MF	GO:0061731	ribonucleoside-diphosphate reductase activity	None	Extended
BP	GO:0071704	organic substance metabolic process	None	Extended
BP	GO:0090304	nucleic acid metabolic process	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:0097367	carbohydrate derivative binding	None	Extended
MF	GO:1901265	nucleoside phosphate binding	None	Extended
BP	GO:1901360	organic cyclic compound metabolic process	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended

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Type	GO Term	Name	Evidence	Source
MF	GO:0003677	DNA binding	IEP	Lactuca Sativa GO terms from Neighborhoods
MF	GO:0003678	DNA helicase activity	IEP	Lactuca Sativa GO terms from Neighborhoods
MF	GO:0003887	DNA-directed DNA polymerase activity	IEP	Lactuca Sativa GO terms from Neighborhoods
MF	GO:0004797	thymidine kinase activity	IEP	Lactuca Sativa GO terms from Neighborhoods
CC	GO:0005634	nucleus	IEP	Lactuca Sativa GO terms from Neighborhoods
CC	GO:0005667	transcription regulator complex	IEP	Lactuca Sativa GO terms from Neighborhoods
BP	GO:0006298	mismatch repair	IEP	Lactuca Sativa GO terms from Neighborhoods
BP	GO:0006633	fatty acid biosynthetic process	IEP	Lactuca Sativa GO terms from Neighborhoods
BP	GO:0006950	response to stress	IEP	Lactuca Sativa GO terms from Neighborhoods
BP	GO:0006974	DNA damage response	IEP	Lactuca Sativa GO terms from Neighborhoods
MF	GO:0008017	microtubule binding	IEP	Lactuca Sativa GO terms from Neighborhoods
MF	GO:0008092	cytoskeletal protein binding	IEP	Lactuca Sativa GO terms from Neighborhoods
BP	GO:0009262	deoxyribonucleotide metabolic process	IEP	Lactuca Sativa GO terms from Neighborhoods
BP	GO:0009263	deoxyribonucleotide biosynthetic process	IEP	Lactuca Sativa GO terms from Neighborhoods
MF	GO:0015631	tubulin binding	IEP	Lactuca Sativa GO terms from Neighborhoods
MF	GO:0019136	deoxynucleoside kinase activity	IEP	Lactuca Sativa GO terms from Neighborhoods
MF	GO:0019205	nucleobase-containing compound kinase activity	IEP	Lactuca Sativa GO terms from Neighborhoods
MF	GO:0019206	nucleoside kinase activity	IEP	Lactuca Sativa GO terms from Neighborhoods
MF	GO:0030983	mismatched DNA binding	IEP	Lactuca Sativa GO terms from Neighborhoods
BP	GO:0033554	cellular response to stress	IEP	Lactuca Sativa GO terms from Neighborhoods
MF	GO:0034061	DNA polymerase activity	IEP	Lactuca Sativa GO terms from Neighborhoods
CC	GO:0043227	membrane-bounded organelle	IEP	Lactuca Sativa GO terms from Neighborhoods
CC	GO:0043231	intracellular membrane-bounded organelle	IEP	Lactuca Sativa GO terms from Neighborhoods
BP	GO:0048478	obsolete replication fork protection	IEP	Lactuca Sativa GO terms from Neighborhoods
BP	GO:0051716	cellular response to stimulus	IEP	Lactuca Sativa GO terms from Neighborhoods
BP	GO:0072330	monocarboxylic acid biosynthetic process	IEP	Lactuca Sativa GO terms from Neighborhoods
MF	GO:0140097	catalytic activity, acting on DNA	IEP	Lactuca Sativa GO terms from Neighborhoods

InterPro domains	Description	Start	Stop
IPR005144	ATP-cone_dom	1	89
IPR013509	RNR_lsu_N	142	212
IPR000788	RNR_lg_C	216	757

External Links

No external refs found!

Lsat_1_v5_gn_4_138460.1 (CLS8, RNR1, DPD2, ATRNR1, R1)

Expression Profile

Co-expression Networks

Functional Annotation