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  5. Bra005523

Bra005523 (SAR1, VAMP722, ATVAMP722)


Aliases : SAR1, VAMP722, ATVAMP722

Description : R-type VAMP7-group component of SNARE longin membrane fusion complex. R-type component *(VAMP721/VAMP722) of SNARE cell-plate vesicle fusion complex


Gene families : OG0000371 (OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol) Phylogenetic Tree(s): OG0000371_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Brassica rapa (Bra) PCC: Bra005523
Cluster Brassica rapa (Bra) Coexpression Clusters (HCCA Algorithm): Cluster_129

Target Alias Description ECC score Gene Family Method Actions
Bra015345 VAMP721,... R-type component *(VAMP721/VAMP722) of SNARE cell-plate... 0.03 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003743 translation initiation factor activity IEP Brassica rapa GO terms from Neighborhoods
BP GO:0006413 translational initiation IEP Brassica rapa GO terms from Neighborhoods
MF GO:0008135 translation factor activity, RNA binding IEP Brassica rapa GO terms from Neighborhoods
MF GO:0008237 metallopeptidase activity IEP Brassica rapa GO terms from Neighborhoods
MF GO:0045182 translation regulator activity IEP Brassica rapa GO terms from Neighborhoods
MF GO:0090079 translation regulator activity, nucleic acid binding IEP Brassica rapa GO terms from Neighborhoods
InterPro domains Description Start Stop
IPR010908 Longin_dom 34 113
IPR042855 V_SNARE_CC 131 217
No external refs found!