Lsat_1_v5_gn_4_135940.1 (RAB18-1, ATRABC1,...)

Aliases : RAB18-1, ATRABC1, ATRAB18, RAB18, RABC1, ATRAB-C1

Description : C-class RAB GTPase

Gene families : OG0017112 (OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	Lactuca sativa (Lsa) PCC: Lsat_1_v5_gn_4_135940.1
Cluster	Lactuca sativa (Lsa) Coexpression Clusters (HCCA Algorithm): Cluster_156

Type	GO Term	Name	Evidence	Source
MF	GO:0000166	nucleotide binding	None	Extended
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003824	catalytic activity	None	Extended
MF	GO:0003924	GTPase activity	IEA	Interproscan
MF	GO:0005488	binding	None	Extended
MF	GO:0005525	GTP binding	IEA	Interproscan
MF	GO:0016462	pyrophosphatase activity	None	Extended
MF	GO:0016787	hydrolase activity	None	Extended
MF	GO:0016817	hydrolase activity, acting on acid anhydrides	None	Extended
MF	GO:0016818	hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides	None	Extended
MF	GO:0017076	purine nucleotide binding	None	Extended
MF	GO:0017111	ribonucleoside triphosphate phosphatase activity	None	Extended
MF	GO:0019001	guanyl nucleotide binding	None	Extended
MF	GO:0032553	ribonucleotide binding	None	Extended
MF	GO:0032555	purine ribonucleotide binding	None	Extended
MF	GO:0032561	guanyl ribonucleotide binding	None	Extended
MF	GO:0035639	purine ribonucleoside triphosphate binding	None	Extended
MF	GO:0036094	small molecule binding	None	Extended
MF	GO:0043167	ion binding	None	Extended
MF	GO:0043168	anion binding	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:0097367	carbohydrate derivative binding	None	Extended
MF	GO:1901265	nucleoside phosphate binding	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended

Type	GO Term	Name	Evidence	Source
MF	GO:0003678	DNA helicase activity	IEP	Lactuca Sativa GO terms from Neighborhoods
MF	GO:0005096	GTPase activator activity	IEP	Lactuca Sativa GO terms from Neighborhoods
BP	GO:0006260	DNA replication	IEP	Lactuca Sativa GO terms from Neighborhoods
MF	GO:0008047	enzyme activator activity	IEP	Lactuca Sativa GO terms from Neighborhoods
MF	GO:0008146	sulfotransferase activity	IEP	Lactuca Sativa GO terms from Neighborhoods
MF	GO:0010309	acireductone dioxygenase [iron(II)-requiring] activity	IEP	Lactuca Sativa GO terms from Neighborhoods
MF	GO:0016782	transferase activity, transferring sulphur-containing groups	IEP	Lactuca Sativa GO terms from Neighborhoods
MF	GO:0043138	3'-5' DNA helicase activity	IEP	Lactuca Sativa GO terms from Neighborhoods
MF	GO:0140677	molecular function activator activity	IEP	Lactuca Sativa GO terms from Neighborhoods
MF	GO:1990380	K48-linked deubiquitinase activity	IEP	Lactuca Sativa GO terms from Neighborhoods

InterPro domains	Description	Start	Stop
IPR001806	Small_GTPase	14	175

External Links

No external refs found!