Heatmap: Cluster_156 (Lactuca sativa (Lsa) Coexpression Clusters (HCCA Algorithm))

View as: (view raw or row-normalized)

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(Values are log2 transformed ratios of a genes expression in a sample divided by the mean expression level)

Gene
Light: 268 uE m-2 s-1
Light: 202.5 uE m-2 s-1 (Control)
Light: 135 uE m-2 s-1
Light: 67.5 uE m-2 s-1
Photoperiod: L24
Photoperiod: L20D4 (Control)
Photoperiod: L12D12
Photoperiod: L8D16
RBW: 4:1:1 (Control)
RBW: 4:1:0
RBW: 3:1:1
RBW: 3:1:0
Nitrogen: 0%
Nitrogen: 25%
Nitrogen: 50%
Nitrogen: 100% (Control)
Nitrogen: 150%
Phosphorous: 0%
Phosphorous: 25%
Phosphorous: 50%
Phosphorous: 100% (Control)
Phosphorous: 150%
Potassium: 0%
Potassium: 25%
Potassium: 50%
Potassium: 100% (Control)
Potassium: 150%
Temperature: 20°C
Temperature: 25°C (Control)
Temperature: 30°C
Temperature: 35°C
-0.38 0.11 -1.35 -1.26 1.56 0.34 -1.4 -1.76 -1.68 -1.75 -1.34 -1.81 0.08 1.14 0.33 -1.08 -1.88 2.71 -1.06 -2.61 -1.47 -1.77 2.38 -1.72 -1.26 -1.18 -1.06 -2.0 -0.53 -1.03 -0.36
Lsat_1_v5_gn_1_111600.1 (Sec. 61-alpha1)
0.31 0.32 0.26 -0.11 0.45 -0.02 -0.59 -0.34 -0.53 -0.53 -0.43 -0.31 0.14 0.36 0.29 -0.18 -0.3 1.12 -0.21 -0.51 -0.32 -0.39 0.95 -0.43 -0.44 -0.46 -0.35 -0.27 0.26 0.08 0.02
-0.1 -0.17 -0.18 -0.16 0.87 0.2 -0.4 -0.5 -0.4 -0.26 -0.19 -0.35 -0.08 0.39 0.47 -0.06 -0.27 1.09 -0.35 -0.44 -0.36 -0.46 1.13 -0.6 -0.47 -0.3 -0.17 -0.35 0.15 -0.04 -0.04
0.26 0.27 -0.51 -0.69 1.31 0.15 -0.89 -0.44 -0.81 -0.67 -0.37 -0.63 -0.79 0.89 0.55 -0.64 -1.09 1.84 -0.29 -0.72 -0.68 -0.69 1.53 -0.9 -0.88 -0.91 -0.46 -0.81 0.0 -0.32 -0.11
0.28 0.02 -0.45 -0.33 1.42 0.26 -2.58 -2.99 -1.01 -0.94 -0.78 -0.84 -0.67 0.81 1.31 -0.76 -1.63 2.36 -0.81 -1.92 -1.36 -1.28 2.22 -1.69 -1.19 -1.59 -1.31 -0.77 -0.69 -0.56 -1.53
0.04 0.19 -0.07 -0.08 0.42 0.2 -0.46 -0.52 -0.37 -0.46 -0.34 -0.6 -0.23 0.55 0.31 -0.43 -0.46 1.48 -0.38 -0.58 -0.65 -0.46 1.28 -0.53 -0.46 -0.65 -0.42 -0.79 0.15 0.12 0.53
0.09 -0.09 0.27 -1.1 1.63 0.0 -1.75 -3.0 -1.34 -1.55 -1.26 -1.58 0.56 0.26 -0.1 -1.0 -1.34 2.48 -1.14 -1.55 -1.56 -1.79 2.74 -1.73 -1.23 -1.45 -1.23 -1.79 -1.62 -1.65 -0.61
0.03 -0.08 -0.73 -0.79 1.49 1.14 -1.48 -1.74 -1.07 -1.07 -0.85 -1.57 -0.74 0.46 0.75 -0.4 -1.42 2.24 -0.59 -1.62 -0.93 -0.83 2.29 -1.5 -1.29 -1.06 -1.05 -1.08 -0.18 -0.78 -2.22
-0.32 0.4 -0.75 -0.66 0.64 0.29 -0.56 -0.75 -0.29 -0.29 -0.21 -0.42 -0.53 0.68 0.43 -0.23 -0.54 1.64 -0.31 -0.52 -0.45 -0.34 1.35 -0.65 -0.47 -0.24 -0.26 -0.59 -0.11 -0.16 -0.07
0.48 0.24 0.16 -0.22 1.1 0.08 -1.11 -1.01 -0.65 -0.85 -0.54 -0.6 -0.45 0.6 0.64 -0.28 -0.63 1.71 -0.48 -0.74 -0.61 -0.64 1.68 -0.91 -0.84 -0.83 -0.77 -0.52 -0.16 -0.31 -0.43
0.48 -0.17 0.22 0.21 0.98 0.17 -1.38 -1.78 -0.54 -0.46 -0.36 -0.6 -1.1 0.93 0.8 -0.32 -1.07 1.71 -0.31 -0.98 -0.66 -0.82 1.55 -1.02 -1.05 -0.85 -0.88 -0.64 0.13 -0.05 -0.22
0.28 -0.24 0.31 0.4 0.68 -0.04 -1.09 -1.48 -0.57 -0.48 -0.56 -0.7 -0.56 0.67 0.48 -0.21 -0.46 1.77 -0.27 -0.62 -0.56 -0.69 1.46 -0.66 -0.65 -0.57 -0.59 -0.46 -0.14 -0.27 0.04
0.19 0.92 -0.5 -0.68 1.5 0.12 -1.37 -1.45 -0.81 -1.39 -1.57 -1.5 -0.71 1.04 0.51 -0.64 -1.52 1.8 -0.63 -1.42 -1.3 -1.54 2.06 -1.88 -0.88 -1.09 -1.05 -2.0 0.24 0.11 0.6
-0.29 0.56 -1.13 -0.97 1.12 0.81 -1.33 -2.22 -0.54 -0.78 -0.75 -1.07 -1.43 0.59 1.0 -0.14 -1.23 1.8 -0.7 -1.29 -1.22 -1.07 2.07 -1.23 -1.23 -0.3 -1.24 -0.85 0.36 0.42 -0.34
-0.86 -1.29 -5.49 -2.74 1.41 0.4 -1.28 -3.93 -1.53 -1.42 -1.36 -2.22 -0.12 1.07 0.7 -1.65 -1.83 2.8 -1.39 -1.12 -1.21 -0.91 2.76 -1.09 -3.16 -1.79 -1.81 -2.14 -0.82 -1.21 -0.11
0.69 0.57 -0.55 -1.96 1.49 0.33 -1.97 -2.42 -1.73 -1.89 -1.24 -2.38 -0.63 0.87 1.27 -0.76 -1.43 2.31 -0.6 -2.13 -1.22 -1.43 2.51 -1.42 -1.46 -1.57 -1.29 -1.48 -0.88 -1.13 -2.08
-0.09 1.01 -0.3 -0.65 1.48 0.25 -1.05 -1.01 -1.02 -1.14 -0.85 -1.08 -0.87 1.0 0.82 -0.67 -1.36 2.24 -0.57 -1.64 -1.39 -1.28 1.81 -1.6 -1.28 -1.3 -1.27 -1.6 -0.06 -0.45 -0.47
0.34 0.79 -0.63 -2.1 2.16 1.02 -1.75 -1.33 -1.88 -1.76 -1.31 -2.03 -0.32 1.09 0.68 -0.95 -1.82 1.73 -1.03 -2.16 -1.59 -1.56 2.52 -1.5 -1.48 -1.85 -1.1 -1.75 -0.76 -1.21 -2.4
0.38 0.18 -0.97 -1.38 1.81 0.71 -1.97 -2.0 -1.14 -1.64 -1.19 -1.85 -0.76 0.97 1.05 -0.49 -1.72 2.43 -0.6 -1.42 -1.09 -1.03 1.54 -1.44 -1.13 -1.12 -0.83 -1.32 0.07 -0.51 -0.73
-3.16 -5.46 -5.11 -5.22 2.23 1.52 -6.22 -4.9 -4.08 -4.67 -2.71 -4.45 -1.7 1.87 0.0 -0.76 -3.87 2.92 -1.24 -3.99 -2.64 -2.28 2.63 -1.57 -1.72 -2.68 -1.96 -2.83 -0.61 -1.32 -1.27
0.61 0.92 -0.6 -0.84 1.99 0.71 -1.22 -1.68 -0.88 -1.07 -0.76 -1.33 -0.97 0.62 0.8 -0.63 -1.38 1.59 -0.29 -1.31 -0.87 -0.85 1.8 -1.53 -1.24 -1.17 -0.88 -0.65 -0.1 -0.33 -1.85
-0.09 -0.34 -0.52 -0.56 0.7 0.63 -0.77 -0.7 -0.67 -0.64 -0.54 -0.68 -0.35 0.59 0.26 -0.28 -0.55 1.66 -0.12 -0.6 -0.38 -0.22 1.5 -0.29 -0.2 -0.27 -0.15 -0.2 -0.11 -0.32 -0.5
0.32 0.2 -0.58 -1.67 2.01 0.45 -4.53 -2.57 -3.06 -2.09 -0.87 -2.27 -0.66 0.85 1.01 -1.48 -2.84 2.33 -0.41 -3.04 -0.95 -1.19 2.43 -0.8 -0.98 -1.65 -0.4 -1.65 -1.49 -1.5 -0.95
0.62 -0.08 -1.26 -1.9 2.08 0.42 -2.75 -2.13 -2.23 -2.44 -1.57 -2.21 -1.08 0.77 1.0 -1.23 -2.2 2.64 -0.73 -2.41 -1.59 -1.01 2.38 -1.66 -1.66 -1.46 -1.26 -1.73 -0.96 -1.16 -1.54
-0.21 -0.35 -1.76 -2.87 1.49 0.37 -2.71 -2.84 -2.11 -3.25 -1.18 -1.42 -0.21 0.21 0.5 -1.74 -1.42 2.53 -1.06 -2.4 -1.73 -1.23 3.02 -1.49 -1.27 -0.87 -1.4 -2.51 -1.4 -0.5 0.04
-0.56 -0.02 -0.41 -0.36 0.77 0.44 -0.53 -0.74 -0.44 -0.48 -0.28 -0.7 -0.64 0.6 0.56 -0.0 -0.51 1.75 -0.22 -0.7 -0.5 -0.49 1.47 -0.8 -0.58 -0.5 -0.31 -1.0 0.08 0.04 -0.21
0.01 -0.13 0.11 -0.09 0.38 0.37 -0.31 -0.33 -0.76 -0.61 -0.47 -0.58 0.14 0.39 0.25 -0.18 -0.3 1.45 -0.16 -0.42 -0.45 -0.26 1.11 -0.4 -0.3 -0.23 -0.26 -0.33 -0.11 -0.11 -0.08
0.29 0.28 0.23 -0.1 0.63 0.04 -0.75 -0.79 -0.63 -0.55 -0.39 -0.58 0.04 0.71 0.4 -0.25 -0.46 1.42 -0.25 -0.63 -0.48 -0.46 1.33 -0.72 -0.53 -0.46 -0.48 -0.49 -0.11 -0.14 -0.02
0.22 0.23 -0.1 -0.4 0.56 0.17 -0.45 -0.57 -0.48 -0.45 -0.35 -0.62 -0.22 0.71 0.49 -0.14 -0.47 1.28 -0.03 -0.5 -0.41 -0.44 1.15 -0.64 -0.46 -0.41 -0.38 -0.52 0.12 -0.06 0.13
0.66 -0.07 -0.57 -1.9 2.16 0.22 -4.92 -6.14 -2.25 -1.82 -2.46 -2.63 -1.23 1.37 -0.2 -0.82 -2.37 2.72 -1.08 -2.49 -2.52 -2.37 2.48 -1.86 -1.73 -2.81 -1.18 -2.58 -1.25 -1.81 0.21
0.31 0.85 0.29 -0.16 0.96 0.19 -1.39 -2.01 -0.13 -0.23 -0.06 -0.38 -0.86 0.12 0.24 -0.12 -0.54 1.45 -0.41 -0.68 -0.51 -0.46 1.12 -0.74 -0.62 -0.19 -0.11 -0.62 -0.15 -0.06 -0.1
-0.45 -0.46 -0.12 -0.51 0.7 0.05 -0.92 -1.07 -0.71 -0.56 -0.47 -0.42 -0.52 0.76 0.59 -0.34 -0.85 2.06 -0.06 -0.79 -0.41 -0.65 1.5 -0.55 -0.81 -0.63 -0.45 -0.87 0.04 -0.04 0.19
-0.03 0.37 -0.05 0.0 0.9 0.5 -0.82 -0.94 -0.54 -0.72 -0.37 -0.71 -0.57 0.73 0.48 -0.27 -0.77 1.65 -0.38 -0.67 -0.7 -0.47 1.4 -0.6 -0.72 -0.5 -0.39 -0.81 -0.01 -0.24 -0.14
-0.85 -0.35 -0.92 -1.33 0.99 0.68 -0.8 -1.69 -0.68 -0.43 -0.22 -0.64 -0.97 0.85 0.77 -0.93 -1.16 2.36 -0.38 -1.0 -0.59 -0.5 1.82 -1.09 -1.05 -0.95 -0.87 -1.23 0.03 -0.19 -0.42
0.38 0.17 0.41 0.09 0.24 0.09 -0.48 -0.5 -0.57 -0.55 -0.45 -0.62 -0.34 0.46 0.29 -0.54 -0.55 1.72 -0.41 -0.6 -0.64 -0.39 1.14 -0.68 -0.63 -0.46 -0.41 -0.89 0.13 0.03 0.39
-0.05 0.17 0.25 -0.26 0.06 -0.08 -0.45 -0.58 -0.57 -0.52 -0.38 -0.4 -0.16 0.39 0.01 -0.28 -0.32 1.76 -0.26 -0.57 -0.69 -0.58 1.12 -0.43 -0.26 -0.46 -0.38 -0.88 0.03 0.23 0.67
0.16 0.34 -0.17 -0.46 0.59 0.49 -0.8 -1.1 -0.53 -0.46 -0.38 -0.53 -0.46 0.81 0.45 -0.05 -0.54 1.6 -0.14 -0.84 -0.55 -0.52 1.43 -0.73 -0.61 -0.46 -0.51 -0.67 0.01 0.0 -0.39
-0.08 0.04 -0.33 -0.09 1.42 0.38 -1.28 -1.55 -0.58 -0.5 -0.32 -0.56 -0.86 0.39 0.56 0.04 -0.54 1.56 -0.47 -0.97 -0.64 -0.7 1.75 -1.15 -1.08 -0.91 -0.69 -0.67 0.37 0.28 -0.67
0.06 -0.02 0.18 0.14 0.34 0.12 -0.61 -0.67 -0.46 -0.39 -0.42 -0.42 0.2 0.48 0.28 -0.1 -0.25 1.25 -0.34 -0.49 -0.38 -0.29 1.15 -0.6 -0.38 -0.25 -0.23 -0.43 0.06 -0.03 0.0
1.0 1.64 -0.13 -1.14 1.69 0.83 -1.73 -2.2 -1.18 -1.24 -1.01 -1.38 -0.87 0.46 0.62 -0.39 -1.05 1.67 -0.7 -1.51 -1.09 -1.12 1.93 -2.01 -1.55 -0.97 -1.21 -0.91 -0.61 -0.62 -1.97
-0.18 0.34 -0.95 -1.3 1.21 0.85 -0.77 -1.33 -0.67 -0.83 -0.72 -1.18 -0.85 0.39 0.43 -0.32 -0.75 1.7 -0.33 -0.7 -0.58 -0.47 2.12 -0.8 -0.8 -0.34 -0.56 -0.63 -0.04 -0.33 -0.85
-0.03 0.11 -0.51 -0.46 0.86 0.37 -0.07 -0.05 -0.46 -0.38 -0.27 -0.51 -0.43 0.59 0.52 -0.2 -0.56 1.39 -0.09 -0.47 -0.5 -0.31 0.99 -0.52 -0.56 -0.35 -0.25 -0.38 -0.03 -0.15 -0.33
0.02 0.04 0.14 0.2 0.58 0.19 -0.62 -0.7 -0.33 -0.33 -0.18 -0.24 -0.02 0.38 0.27 -0.03 -0.34 1.26 -0.33 -0.57 -0.39 -0.29 0.87 -0.56 -0.38 -0.29 -0.27 -0.31 0.02 0.01 0.02
0.52 0.36 -0.25 -0.59 0.67 0.63 -0.59 -0.65 -0.81 -1.03 -0.75 -1.15 -0.17 0.66 0.57 -0.24 -0.6 1.5 -0.24 -1.02 -0.48 -0.49 1.31 -0.51 -0.47 -0.48 -0.44 -0.7 0.31 -0.1 0.04
0.19 0.11 0.35 0.2 0.29 0.35 -0.64 -0.72 -0.52 -0.53 -0.48 -0.65 -0.19 0.58 0.39 0.04 -0.29 1.51 -0.33 -0.57 -0.38 -0.33 1.22 -0.58 -0.39 -0.27 -0.31 -0.34 -0.3 -0.38 -0.58
0.59 0.64 -1.81 -2.07 1.92 0.83 -2.87 -2.54 -1.84 -2.44 -1.34 -2.24 -0.01 0.73 0.67 -1.21 -2.35 2.33 -0.23 -1.36 -1.33 -1.06 2.0 -1.78 -1.08 -1.07 -1.47 -0.45 -0.04 -0.08 -2.44
-0.26 -0.4 -0.41 -0.11 0.64 0.41 -0.65 -0.87 -0.45 -0.48 -0.27 -0.74 -0.67 0.7 0.59 -0.53 -0.71 1.79 0.35 -0.66 -0.49 -0.57 1.23 -0.74 -0.54 -0.49 -0.4 -0.72 0.11 -0.09 0.28
0.36 0.24 -0.78 -1.17 1.77 0.16 -2.39 -1.84 -0.96 -0.86 -1.04 -2.16 0.38 0.99 0.76 -0.94 -1.09 2.35 -1.0 -1.63 -2.07 -0.63 2.37 -1.57 -0.57 -2.46 -0.99 -1.52 -1.26 -2.82 -2.37
0.77 1.01 0.19 -0.48 1.65 0.59 -1.71 -1.78 -1.22 -1.32 -0.86 -1.45 -0.29 0.77 0.65 -0.33 -0.99 1.78 -0.51 -1.4 -1.12 -0.96 1.69 -1.48 -1.06 -0.83 -1.23 -0.98 -0.33 -0.6 -0.87
-0.34 -0.3 0.22 0.11 0.19 0.37 -0.63 -0.8 -0.26 -0.32 -0.43 -0.43 -0.34 0.53 0.43 -0.27 -0.4 1.65 -0.28 -0.56 -0.32 -0.47 1.26 -0.54 -0.53 -0.35 -0.5 -0.27 -0.03 -0.07 0.01
-0.23 -0.22 -0.1 -0.06 0.66 0.31 -0.71 -0.89 -0.16 -0.27 -0.02 -0.19 -0.89 0.78 0.5 -0.39 -0.74 1.72 0.26 -0.79 -0.75 -0.57 1.41 -0.91 -0.68 -0.71 -0.51 -0.67 0.11 -0.04 -0.56
0.61 0.6 0.08 -0.77 0.95 -0.16 -1.44 -1.53 -0.84 -0.83 -0.61 -0.6 -0.23 0.67 0.67 -0.28 -0.59 1.77 -0.47 -0.86 -0.88 -0.83 1.68 -1.01 -0.81 -0.94 -0.86 -0.87 -0.1 0.08 0.19
-1.01 -0.96 -0.96 -0.89 1.2 0.77 -1.67 -1.28 -1.07 -1.29 -1.04 -1.08 -0.28 1.02 0.46 -0.46 -0.78 2.32 -0.28 -1.02 -0.97 -0.63 1.92 -0.82 -0.77 -0.76 -0.46 -0.77 -0.19 -0.33 -0.28
0.62 0.6 -0.06 -0.61 1.68 0.13 -1.94 -2.43 -0.85 -0.71 -0.74 -0.79 -0.62 0.72 0.68 -0.67 -1.1 2.25 -0.5 -1.37 -1.26 -1.06 1.46 -1.25 -1.16 -1.29 -1.03 -1.09 -0.21 -0.21 -0.28
-0.46 0.63 -1.03 -2.35 1.93 0.51 -1.58 -2.39 -0.81 -0.91 -0.74 -1.18 -0.55 0.43 0.31 -0.55 -1.5 2.06 -1.0 -1.56 -1.23 -1.08 2.7 -1.82 -1.33 -1.07 -1.02 -1.25 -1.08 -1.01 -1.43
-0.24 -0.64 -0.69 -0.02 0.9 0.31 -0.95 -1.38 -0.45 -0.4 -0.1 -0.49 -0.22 0.4 0.43 -0.14 -0.57 1.94 -0.11 -0.68 -0.52 -0.63 1.37 -0.81 -0.6 -0.61 -0.42 -0.53 0.09 -0.04 -0.03
0.47 1.35 -0.56 -1.46 1.63 0.66 -1.55 -1.87 -0.65 -0.93 -0.74 -1.16 -1.38 0.31 0.5 -0.37 -1.13 1.86 -0.56 -1.09 -0.95 -1.02 1.38 -1.12 -1.1 -0.47 -1.05 -0.68 0.06 0.24 -0.2
-1.21 -2.3 -4.83 -3.94 2.01 0.19 -3.59 -4.69 -4.25 -3.81 -3.2 -4.91 0.1 1.04 1.27 -2.58 -3.57 3.04 -0.89 -3.26 -2.27 -2.64 3.08 -3.1 -2.52 -2.96 -2.16 -2.2 -2.57 -2.92 -4.41
0.02 0.25 -0.28 -0.37 0.6 0.3 -0.26 -0.43 -0.53 -0.43 -0.27 -0.34 0.03 0.55 0.47 -0.04 -0.15 1.26 -0.18 -0.44 -0.33 -0.4 0.91 -0.6 -0.42 -0.23 -0.29 -0.27 -0.2 -0.07 -0.13

Details

Dark gray cells indicate values where the raw expression is zero (cannot be log-transformed). Blue cells indicate samples where the expression of the gene is below average and red cells indicate the gene is expressed above average in the sample. White cells are average.