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Aliases : NACA2
Description : not classified
Gene families : OG0036646 (OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol) Phylogenetic Tree(s): No tree available for this family
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | Lactuca sativa (Lsa) PCC: Lsat_1_v5_gn_4_129260.1 | |
| Cluster | Lactuca sativa (Lsa) Coexpression Clusters (HCCA Algorithm): Cluster_111 |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0003723 | RNA binding | IEA | Interproscan |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| BP | GO:0000375 | RNA splicing, via transesterification reactions | IEP | Lactuca Sativa GO terms from Neighborhoods |
| BP | GO:0000377 | RNA splicing, via transesterification reactions with bulged adenosine as nucleophile | IEP | Lactuca Sativa GO terms from Neighborhoods |
| BP | GO:0000398 | mRNA splicing, via spliceosome | IEP | Lactuca Sativa GO terms from Neighborhoods |
| MF | GO:0004568 | chitinase activity | IEP | Lactuca Sativa GO terms from Neighborhoods |
| BP | GO:0006022 | aminoglycan metabolic process | IEP | Lactuca Sativa GO terms from Neighborhoods |
| BP | GO:0006026 | aminoglycan catabolic process | IEP | Lactuca Sativa GO terms from Neighborhoods |
| BP | GO:0006030 | chitin metabolic process | IEP | Lactuca Sativa GO terms from Neighborhoods |
| BP | GO:0006032 | chitin catabolic process | IEP | Lactuca Sativa GO terms from Neighborhoods |
| BP | GO:0006040 | amino sugar metabolic process | IEP | Lactuca Sativa GO terms from Neighborhoods |
| MF | GO:0008061 | chitin binding | IEP | Lactuca Sativa GO terms from Neighborhoods |
| BP | GO:0016998 | cell wall macromolecule catabolic process | IEP | Lactuca Sativa GO terms from Neighborhoods |
| BP | GO:0044036 | cell wall macromolecule metabolic process | IEP | Lactuca Sativa GO terms from Neighborhoods |
| BP | GO:0046348 | amino sugar catabolic process | IEP | Lactuca Sativa GO terms from Neighborhoods |
| BP | GO:1901071 | glucosamine-containing compound metabolic process | IEP | Lactuca Sativa GO terms from Neighborhoods |
| BP | GO:1901072 | glucosamine-containing compound catabolic process | IEP | Lactuca Sativa GO terms from Neighborhoods |
| BP | GO:1901136 | carbohydrate derivative catabolic process | IEP | Lactuca Sativa GO terms from Neighborhoods |
| InterPro domains | Description | Start | Stop |
|---|---|---|---|
| IPR001313 | Pumilio_RNA-bd_rpt | 469 | 503 |
| IPR001313 | Pumilio_RNA-bd_rpt | 434 | 450 |
| IPR001313 | Pumilio_RNA-bd_rpt | 286 | 319 |
| IPR001313 | Pumilio_RNA-bd_rpt | 253 | 281 |
| IPR001313 | Pumilio_RNA-bd_rpt | 513 | 526 |
| IPR001313 | Pumilio_RNA-bd_rpt | 328 | 354 |
| IPR001313 | Pumilio_RNA-bd_rpt | 397 | 431 |
| IPR001313 | Pumilio_RNA-bd_rpt | 364 | 394 |
| No external refs found! |