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  5. Lsat_1_v5_gn_4_111881.1

Lsat_1_v5_gn_4_111881.1 (ATERDJ2B)


Aliases : ATERDJ2B

Description : not classified


Gene families : OG0000051 (OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol) Phylogenetic Tree(s): OG0000051_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Lactuca sativa (Lsa) PCC: Lsat_1_v5_gn_4_111881.1
Cluster Lactuca sativa (Lsa) Coexpression Clusters (HCCA Algorithm): Cluster_94

Target Alias Description ECC score Gene Family Method Actions
Lsat_1_v5_gn_3_721.1 ATRPB15.9,... not classified 0.03 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol
Lsat_1_v5_gn_5_60801.1 No alias not classified 0.05 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0006354 DNA-templated transcription elongation IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0006368 transcription elongation by RNA polymerase II IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0006835 dicarboxylic acid transport IEP Lactuca Sativa GO terms from Neighborhoods
CC GO:0008023 transcription elongation factor complex IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0015711 organic anion transport IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0015740 C4-dicarboxylate transport IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0015743 malate transport IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0015849 organic acid transport IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0016570 histone modification IEP Lactuca Sativa GO terms from Neighborhoods
CC GO:0016593 Cdc73/Paf1 complex IEP Lactuca Sativa GO terms from Neighborhoods
MF GO:0016788 hydrolase activity, acting on ester bonds IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0046942 carboxylic acid transport IEP Lactuca Sativa GO terms from Neighborhoods

No InterPro domains available for this sequence

No external refs found!