Lsat_1_v5_gn_4_109881.1

Description : not classified

Gene families : OG0036458 (OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)

Attention: This gene has low abundance.

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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	Lactuca sativa (Lsa) PCC: Lsat_1_v5_gn_4_109881.1
Cluster	Lactuca sativa (Lsa) Coexpression Clusters (HCCA Algorithm): Cluster_194

Type	GO Term	Name	Evidence	Source
MF	GO:0000166	nucleotide binding	None	Extended
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003824	catalytic activity	None	Extended
MF	GO:0004497	monooxygenase activity	None	Extended
MF	GO:0004499	N,N-dimethylaniline monooxygenase activity	IEA	Interproscan
MF	GO:0005488	binding	None	Extended
MF	GO:0016491	oxidoreductase activity	None	Extended
MF	GO:0016705	oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen	None	Extended
MF	GO:0016709	oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, NAD(P)H as one donor, and incorporation of one atom of oxygen	None	Extended
MF	GO:0017076	purine nucleotide binding	None	Extended
MF	GO:0030554	adenyl nucleotide binding	None	Extended
MF	GO:0036094	small molecule binding	None	Extended
MF	GO:0043167	ion binding	None	Extended
MF	GO:0043168	anion binding	None	Extended
MF	GO:0050660	flavin adenine dinucleotide binding	IEA	Interproscan
MF	GO:0050661	NADP binding	IEA	Interproscan
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:1901265	nucleoside phosphate binding	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended

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Type	GO Term	Name	Evidence	Source
BP	GO:0000184	nuclear-transcribed mRNA catabolic process, nonsense-mediated decay	IEP	Lactuca Sativa GO terms from Neighborhoods
BP	GO:0000226	microtubule cytoskeleton organization	IEP	Lactuca Sativa GO terms from Neighborhoods
BP	GO:0000956	nuclear-transcribed mRNA catabolic process	IEP	Lactuca Sativa GO terms from Neighborhoods
MF	GO:0003724	RNA helicase activity	IEP	Lactuca Sativa GO terms from Neighborhoods
MF	GO:0004180	carboxypeptidase activity	IEP	Lactuca Sativa GO terms from Neighborhoods
MF	GO:0004185	serine-type carboxypeptidase activity	IEP	Lactuca Sativa GO terms from Neighborhoods
MF	GO:0004568	chitinase activity	IEP	Lactuca Sativa GO terms from Neighborhoods
MF	GO:0004672	protein kinase activity	IEP	Lactuca Sativa GO terms from Neighborhoods
MF	GO:0005515	protein binding	IEP	Lactuca Sativa GO terms from Neighborhoods
MF	GO:0005524	ATP binding	IEP	Lactuca Sativa GO terms from Neighborhoods
CC	GO:0005875	microtubule associated complex	IEP	Lactuca Sativa GO terms from Neighborhoods
BP	GO:0006022	aminoglycan metabolic process	IEP	Lactuca Sativa GO terms from Neighborhoods
BP	GO:0006026	aminoglycan catabolic process	IEP	Lactuca Sativa GO terms from Neighborhoods
BP	GO:0006030	chitin metabolic process	IEP	Lactuca Sativa GO terms from Neighborhoods
BP	GO:0006032	chitin catabolic process	IEP	Lactuca Sativa GO terms from Neighborhoods
BP	GO:0006040	amino sugar metabolic process	IEP	Lactuca Sativa GO terms from Neighborhoods
BP	GO:0006401	RNA catabolic process	IEP	Lactuca Sativa GO terms from Neighborhoods
BP	GO:0006402	mRNA catabolic process	IEP	Lactuca Sativa GO terms from Neighborhoods
BP	GO:0006468	protein phosphorylation	IEP	Lactuca Sativa GO terms from Neighborhoods
BP	GO:0006508	proteolysis	IEP	Lactuca Sativa GO terms from Neighborhoods
BP	GO:0006511	ubiquitin-dependent protein catabolic process	IEP	Lactuca Sativa GO terms from Neighborhoods
BP	GO:0006793	phosphorus metabolic process	IEP	Lactuca Sativa GO terms from Neighborhoods
BP	GO:0006796	phosphate-containing compound metabolic process	IEP	Lactuca Sativa GO terms from Neighborhoods
BP	GO:0006807	nitrogen compound metabolic process	IEP	Lactuca Sativa GO terms from Neighborhoods
BP	GO:0007017	microtubule-based process	IEP	Lactuca Sativa GO terms from Neighborhoods
BP	GO:0007051	spindle organization	IEP	Lactuca Sativa GO terms from Neighborhoods
MF	GO:0008017	microtubule binding	IEP	Lactuca Sativa GO terms from Neighborhoods
MF	GO:0008092	cytoskeletal protein binding	IEP	Lactuca Sativa GO terms from Neighborhoods
BP	GO:0008150	biological_process	IEP	Lactuca Sativa GO terms from Neighborhoods
BP	GO:0008152	metabolic process	IEP	Lactuca Sativa GO terms from Neighborhoods
MF	GO:0008186	ATP-dependent activity, acting on RNA	IEP	Lactuca Sativa GO terms from Neighborhoods
MF	GO:0008236	serine-type peptidase activity	IEP	Lactuca Sativa GO terms from Neighborhoods
MF	GO:0008238	exopeptidase activity	IEP	Lactuca Sativa GO terms from Neighborhoods
MF	GO:0008289	lipid binding	IEP	Lactuca Sativa GO terms from Neighborhoods
BP	GO:0008612	peptidyl-lysine modification to peptidyl-hypusine	IEP	Lactuca Sativa GO terms from Neighborhoods
BP	GO:0009056	catabolic process	IEP	Lactuca Sativa GO terms from Neighborhoods
BP	GO:0009057	macromolecule catabolic process	IEP	Lactuca Sativa GO terms from Neighborhoods
BP	GO:0009605	response to external stimulus	IEP	Lactuca Sativa GO terms from Neighborhoods
BP	GO:0009606	tropism	IEP	Lactuca Sativa GO terms from Neighborhoods
BP	GO:0009890	negative regulation of biosynthetic process	IEP	Lactuca Sativa GO terms from Neighborhoods
BP	GO:0009987	cellular process	IEP	Lactuca Sativa GO terms from Neighborhoods
BP	GO:0010274	hydrotropism	IEP	Lactuca Sativa GO terms from Neighborhoods
BP	GO:0010558	negative regulation of macromolecule biosynthetic process	IEP	Lactuca Sativa GO terms from Neighborhoods
BP	GO:0010629	negative regulation of gene expression	IEP	Lactuca Sativa GO terms from Neighborhoods
MF	GO:0015631	tubulin binding	IEP	Lactuca Sativa GO terms from Neighborhoods
MF	GO:0016301	kinase activity	IEP	Lactuca Sativa GO terms from Neighborhoods
BP	GO:0016310	phosphorylation	IEP	Lactuca Sativa GO terms from Neighborhoods
MF	GO:0016740	transferase activity	IEP	Lactuca Sativa GO terms from Neighborhoods
MF	GO:0016772	transferase activity, transferring phosphorus-containing groups	IEP	Lactuca Sativa GO terms from Neighborhoods
MF	GO:0016773	phosphotransferase activity, alcohol group as acceptor	IEP	Lactuca Sativa GO terms from Neighborhoods
BP	GO:0016998	cell wall macromolecule catabolic process	IEP	Lactuca Sativa GO terms from Neighborhoods
MF	GO:0017171	serine hydrolase activity	IEP	Lactuca Sativa GO terms from Neighborhoods
BP	GO:0019538	protein metabolic process	IEP	Lactuca Sativa GO terms from Neighborhoods
MF	GO:0019899	enzyme binding	IEP	Lactuca Sativa GO terms from Neighborhoods
BP	GO:0019941	modification-dependent protein catabolic process	IEP	Lactuca Sativa GO terms from Neighborhoods
BP	GO:0022402	cell cycle process	IEP	Lactuca Sativa GO terms from Neighborhoods
MF	GO:0030976	thiamine pyrophosphate binding	IEP	Lactuca Sativa GO terms from Neighborhoods
BP	GO:0031327	negative regulation of cellular biosynthetic process	IEP	Lactuca Sativa GO terms from Neighborhoods
MF	GO:0031625	ubiquitin protein ligase binding	IEP	Lactuca Sativa GO terms from Neighborhoods
MF	GO:0032553	ribonucleotide binding	IEP	Lactuca Sativa GO terms from Neighborhoods
MF	GO:0032555	purine ribonucleotide binding	IEP	Lactuca Sativa GO terms from Neighborhoods
MF	GO:0032559	adenyl ribonucleotide binding	IEP	Lactuca Sativa GO terms from Neighborhoods
BP	GO:0034655	nucleobase-containing compound catabolic process	IEP	Lactuca Sativa GO terms from Neighborhoods
MF	GO:0035639	purine ribonucleoside triphosphate binding	IEP	Lactuca Sativa GO terms from Neighborhoods
BP	GO:0036211	protein modification process	IEP	Lactuca Sativa GO terms from Neighborhoods
BP	GO:0043170	macromolecule metabolic process	IEP	Lactuca Sativa GO terms from Neighborhoods
BP	GO:0043412	macromolecule modification	IEP	Lactuca Sativa GO terms from Neighborhoods
BP	GO:0043632	modification-dependent macromolecule catabolic process	IEP	Lactuca Sativa GO terms from Neighborhoods
BP	GO:0044036	cell wall macromolecule metabolic process	IEP	Lactuca Sativa GO terms from Neighborhoods
BP	GO:0044238	primary metabolic process	IEP	Lactuca Sativa GO terms from Neighborhoods
MF	GO:0044389	ubiquitin-like protein ligase binding	IEP	Lactuca Sativa GO terms from Neighborhoods
BP	GO:0046348	amino sugar catabolic process	IEP	Lactuca Sativa GO terms from Neighborhoods
MF	GO:0050997	quaternary ammonium group binding	IEP	Lactuca Sativa GO terms from Neighborhoods
MF	GO:0051087	protein-folding chaperone binding	IEP	Lactuca Sativa GO terms from Neighborhoods
BP	GO:0051225	spindle assembly	IEP	Lactuca Sativa GO terms from Neighborhoods
BP	GO:0051603	proteolysis involved in protein catabolic process	IEP	Lactuca Sativa GO terms from Neighborhoods
MF	GO:0070008	serine-type exopeptidase activity	IEP	Lactuca Sativa GO terms from Neighborhoods
CC	GO:0070652	HAUS complex	IEP	Lactuca Sativa GO terms from Neighborhoods
BP	GO:0070925	organelle assembly	IEP	Lactuca Sativa GO terms from Neighborhoods
BP	GO:0071704	organic substance metabolic process	IEP	Lactuca Sativa GO terms from Neighborhoods
MF	GO:0097367	carbohydrate derivative binding	IEP	Lactuca Sativa GO terms from Neighborhoods
MF	GO:0140096	catalytic activity, acting on a protein	IEP	Lactuca Sativa GO terms from Neighborhoods
MF	GO:0140657	ATP-dependent activity	IEP	Lactuca Sativa GO terms from Neighborhoods
BP	GO:0140694	non-membrane-bounded organelle assembly	IEP	Lactuca Sativa GO terms from Neighborhoods
BP	GO:1901071	glucosamine-containing compound metabolic process	IEP	Lactuca Sativa GO terms from Neighborhoods
BP	GO:1901072	glucosamine-containing compound catabolic process	IEP	Lactuca Sativa GO terms from Neighborhoods
BP	GO:1901136	carbohydrate derivative catabolic process	IEP	Lactuca Sativa GO terms from Neighborhoods
BP	GO:1901564	organonitrogen compound metabolic process	IEP	Lactuca Sativa GO terms from Neighborhoods
BP	GO:1901575	organic substance catabolic process	IEP	Lactuca Sativa GO terms from Neighborhoods

InterPro domains	Description	Start	Stop
IPR020946	Flavin_mOase-like	10	239
IPR020946	Flavin_mOase-like	274	402

External Links

No external refs found!

Lsat_1_v5_gn_4_109881.1

Expression Profile

Co-expression Networks

Functional Annotation