1. Home
  2. Species
  3. Lactuca sativa
  4. Sequence
  5. Lsat_1_v5_gn_4_104040.1

Lsat_1_v5_gn_4_104040.1 (VAC1, ECB2, ATECB2)


Aliases : VAC1, ECB2, ATECB2

Description : RNA editing factor *(ECB2/VAC1)


Gene families : OG0038190 (OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Lactuca sativa (Lsa) PCC: Lsat_1_v5_gn_4_104040.1
Cluster Lactuca sativa (Lsa) Coexpression Clusters (HCCA Algorithm): Cluster_104


Type GO Term Name Evidence Source
MF GO:0008270 zinc ion binding IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source
BP GO:0032259 methylation IEP Lactuca Sativa GO terms from Neighborhoods
InterPro domains Description Start Stop
IPR046848 E_motif 680 744
IPR002885 Pentatricopeptide_rpt 259 306
IPR002885 Pentatricopeptide_rpt 360 408
IPR002885 Pentatricopeptide_rpt 562 609
IPR002885 Pentatricopeptide_rpt 158 205
IPR002885 Pentatricopeptide_rpt 638 661
IPR002885 Pentatricopeptide_rpt 436 462
IPR002885 Pentatricopeptide_rpt 234 257
IPR002885 Pentatricopeptide_rpt 464 490
IPR032867 DYW_dom 781 861
No external refs found!