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Aliases : UBC11, ATUBC11
Description : E2 MUB ubiquitin-conjugating enzyme
Gene families : OG0000797 (OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol) Phylogenetic Tree(s): OG0000797_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | Lactuca sativa (Lsa) PCC: Lsat_1_v5_gn_3_9940.1 | |
| Cluster | Lactuca sativa (Lsa) Coexpression Clusters (HCCA Algorithm): Cluster_172 |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No GO annotation available for this sequence |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| BP | GO:0000375 | RNA splicing, via transesterification reactions | IEP | Lactuca Sativa GO terms from Neighborhoods |
| BP | GO:0000377 | RNA splicing, via transesterification reactions with bulged adenosine as nucleophile | IEP | Lactuca Sativa GO terms from Neighborhoods |
| BP | GO:0000398 | mRNA splicing, via spliceosome | IEP | Lactuca Sativa GO terms from Neighborhoods |
| BP | GO:0000413 | protein peptidyl-prolyl isomerization | IEP | Lactuca Sativa GO terms from Neighborhoods |
| BP | GO:0005984 | disaccharide metabolic process | IEP | Lactuca Sativa GO terms from Neighborhoods |
| BP | GO:0005991 | trehalose metabolic process | IEP | Lactuca Sativa GO terms from Neighborhoods |
| BP | GO:0005992 | trehalose biosynthetic process | IEP | Lactuca Sativa GO terms from Neighborhoods |
| BP | GO:0006354 | DNA-templated transcription elongation | IEP | Lactuca Sativa GO terms from Neighborhoods |
| BP | GO:0006368 | transcription elongation by RNA polymerase II | IEP | Lactuca Sativa GO terms from Neighborhoods |
| CC | GO:0008023 | transcription elongation factor complex | IEP | Lactuca Sativa GO terms from Neighborhoods |
| BP | GO:0008104 | protein localization | IEP | Lactuca Sativa GO terms from Neighborhoods |
| BP | GO:0008150 | biological_process | IEP | Lactuca Sativa GO terms from Neighborhoods |
| BP | GO:0008152 | metabolic process | IEP | Lactuca Sativa GO terms from Neighborhoods |
| BP | GO:0008380 | RNA splicing | IEP | Lactuca Sativa GO terms from Neighborhoods |
| BP | GO:0009058 | biosynthetic process | IEP | Lactuca Sativa GO terms from Neighborhoods |
| BP | GO:0009311 | oligosaccharide metabolic process | IEP | Lactuca Sativa GO terms from Neighborhoods |
| BP | GO:0009312 | oligosaccharide biosynthetic process | IEP | Lactuca Sativa GO terms from Neighborhoods |
| BP | GO:0009987 | cellular process | IEP | Lactuca Sativa GO terms from Neighborhoods |
| BP | GO:0015031 | protein transport | IEP | Lactuca Sativa GO terms from Neighborhoods |
| BP | GO:0016070 | RNA metabolic process | IEP | Lactuca Sativa GO terms from Neighborhoods |
| BP | GO:0016197 | endosomal transport | IEP | Lactuca Sativa GO terms from Neighborhoods |
| BP | GO:0016482 | cytosolic transport | IEP | Lactuca Sativa GO terms from Neighborhoods |
| BP | GO:0016570 | histone modification | IEP | Lactuca Sativa GO terms from Neighborhoods |
| CC | GO:0016593 | Cdc73/Paf1 complex | IEP | Lactuca Sativa GO terms from Neighborhoods |
| MF | GO:0016853 | isomerase activity | IEP | Lactuca Sativa GO terms from Neighborhoods |
| MF | GO:0016866 | intramolecular transferase activity | IEP | Lactuca Sativa GO terms from Neighborhoods |
| MF | GO:0016868 | intramolecular transferase activity, phosphotransferases | IEP | Lactuca Sativa GO terms from Neighborhoods |
| BP | GO:0018208 | peptidyl-proline modification | IEP | Lactuca Sativa GO terms from Neighborhoods |
| CC | GO:0030532 | small nuclear ribonucleoprotein complex | IEP | Lactuca Sativa GO terms from Neighborhoods |
| CC | GO:0030906 | retromer, cargo-selective complex | IEP | Lactuca Sativa GO terms from Neighborhoods |
| BP | GO:0032774 | RNA biosynthetic process | IEP | Lactuca Sativa GO terms from Neighborhoods |
| CC | GO:0032991 | protein-containing complex | IEP | Lactuca Sativa GO terms from Neighborhoods |
| BP | GO:0033036 | macromolecule localization | IEP | Lactuca Sativa GO terms from Neighborhoods |
| BP | GO:0034654 | nucleobase-containing compound biosynthetic process | IEP | Lactuca Sativa GO terms from Neighborhoods |
| BP | GO:0036211 | protein modification process | IEP | Lactuca Sativa GO terms from Neighborhoods |
| BP | GO:0042147 | retrograde transport, endosome to Golgi | IEP | Lactuca Sativa GO terms from Neighborhoods |
| BP | GO:0043170 | macromolecule metabolic process | IEP | Lactuca Sativa GO terms from Neighborhoods |
| BP | GO:0043412 | macromolecule modification | IEP | Lactuca Sativa GO terms from Neighborhoods |
| BP | GO:0044238 | primary metabolic process | IEP | Lactuca Sativa GO terms from Neighborhoods |
| BP | GO:0045184 | establishment of protein localization | IEP | Lactuca Sativa GO terms from Neighborhoods |
| BP | GO:0046351 | disaccharide biosynthetic process | IEP | Lactuca Sativa GO terms from Neighborhoods |
| CC | GO:0046540 | U4/U6 x U5 tri-snRNP complex | IEP | Lactuca Sativa GO terms from Neighborhoods |
| BP | GO:0051641 | cellular localization | IEP | Lactuca Sativa GO terms from Neighborhoods |
| BP | GO:0070727 | cellular macromolecule localization | IEP | Lactuca Sativa GO terms from Neighborhoods |
| BP | GO:0071704 | organic substance metabolic process | IEP | Lactuca Sativa GO terms from Neighborhoods |
| BP | GO:0090304 | nucleic acid metabolic process | IEP | Lactuca Sativa GO terms from Neighborhoods |
| CC | GO:0097525 | spliceosomal snRNP complex | IEP | Lactuca Sativa GO terms from Neighborhoods |
| CC | GO:0097526 | spliceosomal tri-snRNP complex | IEP | Lactuca Sativa GO terms from Neighborhoods |
| CC | GO:0120114 | Sm-like protein family complex | IEP | Lactuca Sativa GO terms from Neighborhoods |
| CC | GO:0140513 | nuclear protein-containing complex | IEP | Lactuca Sativa GO terms from Neighborhoods |
| CC | GO:1990904 | ribonucleoprotein complex | IEP | Lactuca Sativa GO terms from Neighborhoods |
| InterPro domains | Description | Start | Stop |
|---|---|---|---|
| IPR000608 | UBQ-conjugat_E2 | 5 | 141 |
| No external refs found! |