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  5. Bra005392

Bra005392 (EDA28, MEE23, AtBBE-like 15)


Aliases : EDA28, MEE23, AtBBE-like 15

Description : EC_1.1 oxidoreductase acting on CH-OH group of donor


Gene families : OG0003986 (OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol) Phylogenetic Tree(s): OG0003986_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Brassica rapa (Bra) PCC: Bra005392
Cluster Brassica rapa (Bra) Coexpression Clusters (HCCA Algorithm): Cluster_40

Target Alias Description ECC score Gene Family Method Actions
Bra021930 EDA28, MEE23,... EC_1.1 oxidoreductase acting on CH-OH group of donor 0.03 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol

Type GO Term Name Evidence Source
MF GO:0016491 oxidoreductase activity IEA Interproscan
MF GO:0050660 flavin adenine dinucleotide binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0004150 dihydroneopterin aldolase activity IEP Brassica rapa GO terms from Neighborhoods
MF GO:0004650 polygalacturonase activity IEP Brassica rapa GO terms from Neighborhoods
MF GO:0005507 copper ion binding IEP Brassica rapa GO terms from Neighborhoods
BP GO:0006508 proteolysis IEP Brassica rapa GO terms from Neighborhoods
BP GO:0006575 cellular modified amino acid metabolic process IEP Brassica rapa GO terms from Neighborhoods
BP GO:0006760 folic acid-containing compound metabolic process IEP Brassica rapa GO terms from Neighborhoods
BP GO:0006950 response to stress IEP Brassica rapa GO terms from Neighborhoods
BP GO:0007010 cytoskeleton organization IEP Brassica rapa GO terms from Neighborhoods
MF GO:0008233 peptidase activity IEP Brassica rapa GO terms from Neighborhoods
MF GO:0008234 cysteine-type peptidase activity IEP Brassica rapa GO terms from Neighborhoods
MF GO:0008236 serine-type peptidase activity IEP Brassica rapa GO terms from Neighborhoods
MF GO:0016787 hydrolase activity IEP Brassica rapa GO terms from Neighborhoods
MF GO:0016832 aldehyde-lyase activity IEP Brassica rapa GO terms from Neighborhoods
MF GO:0017171 serine hydrolase activity IEP Brassica rapa GO terms from Neighborhoods
BP GO:0042558 pteridine-containing compound metabolic process IEP Brassica rapa GO terms from Neighborhoods
MF GO:0046914 transition metal ion binding IEP Brassica rapa GO terms from Neighborhoods
InterPro domains Description Start Stop
IPR012951 BBE 475 528
IPR006094 Oxid_FAD_bind_N 85 220
No external refs found!