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  5. Lsat_1_v5_gn_3_68040.1

Lsat_1_v5_gn_3_68040.1 (HMGB2, HMG BETA 1, NFD2, NFD02)


Aliases : HMGB2, HMG BETA 1, NFD2, NFD02

Description : DNA bending architectural protein *(HMG-B)


Gene families : OG0034320 (OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Lactuca sativa (Lsa) PCC: Lsat_1_v5_gn_3_68040.1
Cluster Lactuca sativa (Lsa) Coexpression Clusters (HCCA Algorithm): Cluster_221


Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0004363 glutathione synthase activity IEP Lactuca Sativa GO terms from Neighborhoods
CC GO:0005778 peroxisomal membrane IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0006749 glutathione metabolic process IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0006750 glutathione biosynthetic process IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0016559 peroxisome fission IEP Lactuca Sativa GO terms from Neighborhoods
MF GO:0016881 acid-amino acid ligase activity IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0019184 nonribosomal peptide biosynthetic process IEP Lactuca Sativa GO terms from Neighborhoods
CC GO:0031903 microbody membrane IEP Lactuca Sativa GO terms from Neighborhoods
MF GO:0035673 oligopeptide transmembrane transporter activity IEP Lactuca Sativa GO terms from Neighborhoods
CC GO:0042579 microbody IEP Lactuca Sativa GO terms from Neighborhoods
MF GO:0042887 amide transmembrane transporter activity IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0048285 organelle fission IEP Lactuca Sativa GO terms from Neighborhoods
CC GO:0098588 bounding membrane of organelle IEP Lactuca Sativa GO terms from Neighborhoods
MF GO:1904091 non-ribosomal peptide synthetase activity IEP Lactuca Sativa GO terms from Neighborhoods
MF GO:1904680 peptide transmembrane transporter activity IEP Lactuca Sativa GO terms from Neighborhoods
InterPro domains Description Start Stop
IPR009071 HMG_box_dom 44 113
No external refs found!