Bra005309 (PUB23, AtPUB23)

Aliases : PUB23, AtPUB23

Description : E3 ubiquitin ligase

Gene families : OG0006176 (OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)

Attention: This gene has low abundance.

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	Brassica rapa (Bra) PCC: Bra005309
Cluster	Brassica rapa (Bra) Coexpression Clusters (HCCA Algorithm): Cluster_141

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003824	catalytic activity	None	Extended
MF	GO:0004842	ubiquitin-protein transferase activity	IEA	Interproscan
BP	GO:0006807	nitrogen compound metabolic process	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
BP	GO:0016567	protein ubiquitination	IEA	Interproscan
MF	GO:0016740	transferase activity	None	Extended
MF	GO:0016746	acyltransferase activity	None	Extended
MF	GO:0016755	aminoacyltransferase activity	None	Extended
BP	GO:0019538	protein metabolic process	None	Extended
MF	GO:0019787	ubiquitin-like protein transferase activity	None	Extended
BP	GO:0032446	protein modification by small protein conjugation	None	Extended
BP	GO:0036211	protein modification process	None	Extended
BP	GO:0043170	macromolecule metabolic process	None	Extended
BP	GO:0043412	macromolecule modification	None	Extended
BP	GO:0043687	post-translational protein modification	None	Extended
BP	GO:0044238	primary metabolic process	None	Extended
BP	GO:0070647	protein modification by small protein conjugation or removal	None	Extended
BP	GO:0071704	organic substance metabolic process	None	Extended
MF	GO:0140096	catalytic activity, acting on a protein	None	Extended
BP	GO:1901564	organonitrogen compound metabolic process	None	Extended

Type	GO Term	Name	Evidence	Source
MF	GO:0004866	endopeptidase inhibitor activity	IEP	Brassica rapa GO terms from Neighborhoods
MF	GO:0005507	copper ion binding	IEP	Brassica rapa GO terms from Neighborhoods
MF	GO:0008199	ferric iron binding	IEP	Brassica rapa GO terms from Neighborhoods
BP	GO:0009719	response to endogenous stimulus	IEP	Brassica rapa GO terms from Neighborhoods
BP	GO:0009725	response to hormone	IEP	Brassica rapa GO terms from Neighborhoods
BP	GO:0009733	response to auxin	IEP	Brassica rapa GO terms from Neighborhoods
MF	GO:0015291	secondary active transmembrane transporter activity	IEP	Brassica rapa GO terms from Neighborhoods
MF	GO:0015297	antiporter activity	IEP	Brassica rapa GO terms from Neighborhoods
MF	GO:0030414	peptidase inhibitor activity	IEP	Brassica rapa GO terms from Neighborhoods
MF	GO:0042910	xenobiotic transmembrane transporter activity	IEP	Brassica rapa GO terms from Neighborhoods
MF	GO:0043167	ion binding	IEP	Brassica rapa GO terms from Neighborhoods
MF	GO:0043169	cation binding	IEP	Brassica rapa GO terms from Neighborhoods
MF	GO:0046872	metal ion binding	IEP	Brassica rapa GO terms from Neighborhoods
MF	GO:0046914	transition metal ion binding	IEP	Brassica rapa GO terms from Neighborhoods
MF	GO:0061134	peptidase regulator activity	IEP	Brassica rapa GO terms from Neighborhoods
MF	GO:0061135	endopeptidase regulator activity	IEP	Brassica rapa GO terms from Neighborhoods
MF	GO:1901681	sulfur compound binding	IEP	Brassica rapa GO terms from Neighborhoods

InterPro domains	Description	Start	Stop
IPR003613	Ubox_domain	1	58

External Links

No external refs found!