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Aliases : PATH1, AtPAT1H1, PAT1H1
Description : mRNA decay factor *(PAT1)
Gene families : OG0001303 (OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol) Phylogenetic Tree(s): OG0001303_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | Lactuca sativa (Lsa) PCC: Lsat_1_v5_gn_3_35281.1 | |
| Cluster | Lactuca sativa (Lsa) Coexpression Clusters (HCCA Algorithm): Cluster_200 |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No GO annotation available for this sequence |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| BP | GO:0000375 | RNA splicing, via transesterification reactions | IEP | Lactuca Sativa GO terms from Neighborhoods |
| BP | GO:0000377 | RNA splicing, via transesterification reactions with bulged adenosine as nucleophile | IEP | Lactuca Sativa GO terms from Neighborhoods |
| BP | GO:0000398 | mRNA splicing, via spliceosome | IEP | Lactuca Sativa GO terms from Neighborhoods |
| CC | GO:0000786 | nucleosome | IEP | Lactuca Sativa GO terms from Neighborhoods |
| MF | GO:0004518 | nuclease activity | IEP | Lactuca Sativa GO terms from Neighborhoods |
| CC | GO:0005681 | spliceosomal complex | IEP | Lactuca Sativa GO terms from Neighborhoods |
| BP | GO:0006308 | DNA catabolic process | IEP | Lactuca Sativa GO terms from Neighborhoods |
| BP | GO:0006325 | chromatin organization | IEP | Lactuca Sativa GO terms from Neighborhoods |
| BP | GO:0006334 | nucleosome assembly | IEP | Lactuca Sativa GO terms from Neighborhoods |
| BP | GO:0006338 | chromatin remodeling | IEP | Lactuca Sativa GO terms from Neighborhoods |
| BP | GO:0008380 | RNA splicing | IEP | Lactuca Sativa GO terms from Neighborhoods |
| BP | GO:0010921 | regulation of phosphatase activity | IEP | Lactuca Sativa GO terms from Neighborhoods |
| BP | GO:0019220 | regulation of phosphate metabolic process | IEP | Lactuca Sativa GO terms from Neighborhoods |
| BP | GO:0019439 | aromatic compound catabolic process | IEP | Lactuca Sativa GO terms from Neighborhoods |
| MF | GO:0019899 | enzyme binding | IEP | Lactuca Sativa GO terms from Neighborhoods |
| MF | GO:0019902 | phosphatase binding | IEP | Lactuca Sativa GO terms from Neighborhoods |
| MF | GO:0019903 | protein phosphatase binding | IEP | Lactuca Sativa GO terms from Neighborhoods |
| MF | GO:0031267 | small GTPase binding | IEP | Lactuca Sativa GO terms from Neighborhoods |
| BP | GO:0031399 | regulation of protein modification process | IEP | Lactuca Sativa GO terms from Neighborhoods |
| CC | GO:0032993 | protein-DNA complex | IEP | Lactuca Sativa GO terms from Neighborhoods |
| BP | GO:0034655 | nucleobase-containing compound catabolic process | IEP | Lactuca Sativa GO terms from Neighborhoods |
| BP | GO:0034728 | nucleosome organization | IEP | Lactuca Sativa GO terms from Neighborhoods |
| BP | GO:0035303 | regulation of dephosphorylation | IEP | Lactuca Sativa GO terms from Neighborhoods |
| BP | GO:0035304 | regulation of protein dephosphorylation | IEP | Lactuca Sativa GO terms from Neighborhoods |
| BP | GO:0043666 | regulation of phosphoprotein phosphatase activity | IEP | Lactuca Sativa GO terms from Neighborhoods |
| BP | GO:0044248 | cellular catabolic process | IEP | Lactuca Sativa GO terms from Neighborhoods |
| BP | GO:0044270 | cellular nitrogen compound catabolic process | IEP | Lactuca Sativa GO terms from Neighborhoods |
| BP | GO:0046700 | heterocycle catabolic process | IEP | Lactuca Sativa GO terms from Neighborhoods |
| BP | GO:0050790 | regulation of catalytic activity | IEP | Lactuca Sativa GO terms from Neighborhoods |
| MF | GO:0051020 | GTPase binding | IEP | Lactuca Sativa GO terms from Neighborhoods |
| BP | GO:0051174 | regulation of phosphorus metabolic process | IEP | Lactuca Sativa GO terms from Neighborhoods |
| BP | GO:0051246 | regulation of protein metabolic process | IEP | Lactuca Sativa GO terms from Neighborhoods |
| BP | GO:0051336 | regulation of hydrolase activity | IEP | Lactuca Sativa GO terms from Neighborhoods |
| MF | GO:0061630 | ubiquitin protein ligase activity | IEP | Lactuca Sativa GO terms from Neighborhoods |
| MF | GO:0061659 | ubiquitin-like protein ligase activity | IEP | Lactuca Sativa GO terms from Neighborhoods |
| BP | GO:0065004 | protein-DNA complex assembly | IEP | Lactuca Sativa GO terms from Neighborhoods |
| BP | GO:0065009 | regulation of molecular function | IEP | Lactuca Sativa GO terms from Neighborhoods |
| BP | GO:0071824 | protein-DNA complex organization | IEP | Lactuca Sativa GO terms from Neighborhoods |
| MF | GO:0140658 | ATP-dependent chromatin remodeler activity | IEP | Lactuca Sativa GO terms from Neighborhoods |
| BP | GO:1901361 | organic cyclic compound catabolic process | IEP | Lactuca Sativa GO terms from Neighborhoods |
| CC | GO:1990904 | ribonucleoprotein complex | IEP | Lactuca Sativa GO terms from Neighborhoods |
No InterPro domains available for this sequence
| No external refs found! |