- Species
- Tools
- Expression Profiles
- Compare profiles
- Create heatmap
- Export expression levels
- Expression Specificity
- Compare specificities
- Find specific profiles
- Co-expression Networks
- Create custom network
- Find enriched clusters
- Search
Aliases : PAM68
Description : protein involved in PS-II assembly *(PAM68)
Gene families : OG0008520 (OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol) Phylogenetic Tree(s): No tree available for this family
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | Lactuca sativa (Lsa) PCC: Lsat_1_v5_gn_3_28081.1 | |
| Cluster | Lactuca sativa (Lsa) Coexpression Clusters (HCCA Algorithm): Cluster_223 |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No GO annotation available for this sequence |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0002161 | aminoacyl-tRNA editing activity | IEP | Lactuca Sativa GO terms from Neighborhoods |
| MF | GO:0003723 | RNA binding | IEP | Lactuca Sativa GO terms from Neighborhoods |
| MF | GO:0003746 | translation elongation factor activity | IEP | Lactuca Sativa GO terms from Neighborhoods |
| MF | GO:0004109 | coproporphyrinogen oxidase activity | IEP | Lactuca Sativa GO terms from Neighborhoods |
| MF | GO:0004470 | malic enzyme activity | IEP | Lactuca Sativa GO terms from Neighborhoods |
| MF | GO:0004471 | malate dehydrogenase (decarboxylating) (NAD+) activity | IEP | Lactuca Sativa GO terms from Neighborhoods |
| MF | GO:0005315 | inorganic phosphate transmembrane transporter activity | IEP | Lactuca Sativa GO terms from Neighborhoods |
| BP | GO:0006414 | translational elongation | IEP | Lactuca Sativa GO terms from Neighborhoods |
| BP | GO:0006520 | amino acid metabolic process | IEP | Lactuca Sativa GO terms from Neighborhoods |
| BP | GO:0006553 | lysine metabolic process | IEP | Lactuca Sativa GO terms from Neighborhoods |
| BP | GO:0006778 | porphyrin-containing compound metabolic process | IEP | Lactuca Sativa GO terms from Neighborhoods |
| BP | GO:0006779 | porphyrin-containing compound biosynthetic process | IEP | Lactuca Sativa GO terms from Neighborhoods |
| BP | GO:0006817 | phosphate ion transport | IEP | Lactuca Sativa GO terms from Neighborhoods |
| MF | GO:0008839 | 4-hydroxy-tetrahydrodipicolinate reductase | IEP | Lactuca Sativa GO terms from Neighborhoods |
| BP | GO:0009066 | aspartate family amino acid metabolic process | IEP | Lactuca Sativa GO terms from Neighborhoods |
| BP | GO:0009067 | aspartate family amino acid biosynthetic process | IEP | Lactuca Sativa GO terms from Neighborhoods |
| BP | GO:0009085 | lysine biosynthetic process | IEP | Lactuca Sativa GO terms from Neighborhoods |
| BP | GO:0009089 | lysine biosynthetic process via diaminopimelate | IEP | Lactuca Sativa GO terms from Neighborhoods |
| CC | GO:0009654 | photosystem II oxygen evolving complex | IEP | Lactuca Sativa GO terms from Neighborhoods |
| MF | GO:0016615 | malate dehydrogenase activity | IEP | Lactuca Sativa GO terms from Neighborhoods |
| MF | GO:0016627 | oxidoreductase activity, acting on the CH-CH group of donors | IEP | Lactuca Sativa GO terms from Neighborhoods |
| MF | GO:0016628 | oxidoreductase activity, acting on the CH-CH group of donors, NAD or NADP as acceptor | IEP | Lactuca Sativa GO terms from Neighborhoods |
| MF | GO:0016634 | oxidoreductase activity, acting on the CH-CH group of donors, oxygen as acceptor | IEP | Lactuca Sativa GO terms from Neighborhoods |
| MF | GO:0016987 | sigma factor activity | IEP | Lactuca Sativa GO terms from Neighborhoods |
| CC | GO:0019898 | extrinsic component of membrane | IEP | Lactuca Sativa GO terms from Neighborhoods |
| BP | GO:0033013 | tetrapyrrole metabolic process | IEP | Lactuca Sativa GO terms from Neighborhoods |
| BP | GO:0033014 | tetrapyrrole biosynthetic process | IEP | Lactuca Sativa GO terms from Neighborhoods |
| MF | GO:0035596 | methylthiotransferase activity | IEP | Lactuca Sativa GO terms from Neighborhoods |
| BP | GO:0043648 | dicarboxylic acid metabolic process | IEP | Lactuca Sativa GO terms from Neighborhoods |
| BP | GO:0046451 | diaminopimelate metabolic process | IEP | Lactuca Sativa GO terms from Neighborhoods |
| MF | GO:0050497 | alkylthioltransferase activity | IEP | Lactuca Sativa GO terms from Neighborhoods |
| MF | GO:0051536 | iron-sulfur cluster binding | IEP | Lactuca Sativa GO terms from Neighborhoods |
| MF | GO:0051539 | 4 iron, 4 sulfur cluster binding | IEP | Lactuca Sativa GO terms from Neighborhoods |
| MF | GO:0051540 | metal cluster binding | IEP | Lactuca Sativa GO terms from Neighborhoods |
| MF | GO:0052689 | carboxylic ester hydrolase activity | IEP | Lactuca Sativa GO terms from Neighborhoods |
| InterPro domains | Description | Start | Stop |
|---|---|---|---|
| IPR021855 | PAM68-like | 61 | 185 |
| No external refs found! |