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  5. Lsat_1_v5_gn_3_25401.1

Lsat_1_v5_gn_3_25401.1 (UPL4)


Aliases : UPL4

Description : not classified


Gene families : OG0000980 (OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol) Phylogenetic Tree(s): OG0000980_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Lactuca sativa (Lsa) PCC: Lsat_1_v5_gn_3_25401.1
Cluster Lactuca sativa (Lsa) Coexpression Clusters (HCCA Algorithm): Cluster_134

Target Alias Description ECC score Gene Family Method Actions
Lsat_1_v5_gn_7_81620.1 ROPGEF5, ATROPGEF5 not classified 0.03 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0004177 aminopeptidase activity IEP Lactuca Sativa GO terms from Neighborhoods
MF GO:0004784 superoxide dismutase activity IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0006801 superoxide metabolic process IEP Lactuca Sativa GO terms from Neighborhoods
MF GO:0008235 metalloexopeptidase activity IEP Lactuca Sativa GO terms from Neighborhoods
MF GO:0008237 metallopeptidase activity IEP Lactuca Sativa GO terms from Neighborhoods
MF GO:0016721 oxidoreductase activity, acting on superoxide radicals as acceptor IEP Lactuca Sativa GO terms from Neighborhoods
CC GO:0031012 extracellular matrix IEP Lactuca Sativa GO terms from Neighborhoods
MF GO:0070006 metalloaminopeptidase activity IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0072593 reactive oxygen species metabolic process IEP Lactuca Sativa GO terms from Neighborhoods

No InterPro domains available for this sequence

No external refs found!