Lsat_1_v5_gn_3_21560.1 (IBR3)


Aliases : IBR3

Description : monofunctionial hydroxyacyl-CoA dehydrogenase


Gene families : OG0006424 (OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Lactuca sativa (Lsa) PCC: Lsat_1_v5_gn_3_21560.1
Cluster Lactuca sativa (Lsa) Coexpression Clusters (HCCA Algorithm): Cluster_147


Type GO Term Name Evidence Source
MF GO:0016627 oxidoreductase activity, acting on the CH-CH group of donors IEA Interproscan
MF GO:0050660 flavin adenine dinucleotide binding IEA Interproscan
Type GO Term Name Evidence Source
MF GO:0000062 fatty-acyl-CoA binding IEP Lactuca Sativa GO terms from Neighborhoods
CC GO:0000428 DNA-directed RNA polymerase complex IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0003006 developmental process involved in reproduction IEP Lactuca Sativa GO terms from Neighborhoods
CC GO:0005666 RNA polymerase III complex IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0006383 transcription by RNA polymerase III IEP Lactuca Sativa GO terms from Neighborhoods
MF GO:0008289 lipid binding IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0009690 cytokinin metabolic process IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0009790 embryo development IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0009793 embryo development ending in seed dormancy IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0010817 regulation of hormone levels IEP Lactuca Sativa GO terms from Neighborhoods
MF GO:0015299 obsolete solute:proton antiporter activity IEP Lactuca Sativa GO terms from Neighborhoods
MF GO:0016645 oxidoreductase activity, acting on the CH-NH group of donors IEP Lactuca Sativa GO terms from Neighborhoods
MF GO:0019139 cytokinin dehydrogenase activity IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0022414 reproductive process IEP Lactuca Sativa GO terms from Neighborhoods
CC GO:0030880 RNA polymerase complex IEP Lactuca Sativa GO terms from Neighborhoods
MF GO:0033218 amide binding IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0042445 hormone metabolic process IEP Lactuca Sativa GO terms from Neighborhoods
CC GO:0055029 nuclear DNA-directed RNA polymerase complex IEP Lactuca Sativa GO terms from Neighborhoods
CC GO:0061695 transferase complex, transferring phosphorus-containing groups IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0065008 regulation of biological quality IEP Lactuca Sativa GO terms from Neighborhoods
MF GO:0120227 acyl-CoA binding IEP Lactuca Sativa GO terms from Neighborhoods
MF GO:1901567 fatty acid derivative binding IEP Lactuca Sativa GO terms from Neighborhoods
MF GO:1901681 sulfur compound binding IEP Lactuca Sativa GO terms from Neighborhoods
InterPro domains Description Start Stop
IPR009075 AcylCo_DH/oxidase_C 678 824
IPR013786 AcylCoA_DH/ox_N 418 558
IPR002575 Aminoglycoside_PTrfase 43 270
IPR006091 Acyl-CoA_Oxase/DH_mid-dom 563 664
No external refs found!