Lsat_1_v5_gn_3_135781.1

Description : component *(eL20) of large ribosomal-subunit (LSU) proteome

Gene families : OG0001133 (OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol) Phylogenetic Tree(s): OG0001133_tree

Sequence : coding (download), protein (download)

Attention: This gene has low abundance.

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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	Lactuca sativa (Lsa) PCC: Lsat_1_v5_gn_3_135781.1
Cluster	Lactuca sativa (Lsa) Coexpression Clusters (HCCA Algorithm): Cluster_101

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003735	structural constituent of ribosome	IEA	Interproscan
MF	GO:0005198	structural molecule activity	None	Extended
CC	GO:0005575	cellular_component	None	Extended
CC	GO:0005840	ribosome	IEA	Interproscan
BP	GO:0006412	translation	IEA	Interproscan
BP	GO:0006518	peptide metabolic process	None	Extended
BP	GO:0006807	nitrogen compound metabolic process	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
BP	GO:0009058	biosynthetic process	None	Extended
BP	GO:0009059	macromolecule biosynthetic process	None	Extended
BP	GO:0009987	cellular process	None	Extended
BP	GO:0019538	protein metabolic process	None	Extended
BP	GO:0034641	cellular nitrogen compound metabolic process	None	Extended
BP	GO:0043043	peptide biosynthetic process	None	Extended
BP	GO:0043170	macromolecule metabolic process	None	Extended
CC	GO:0043226	organelle	None	Extended
CC	GO:0043228	non-membrane-bounded organelle	None	Extended
CC	GO:0043229	intracellular organelle	None	Extended
CC	GO:0043232	intracellular non-membrane-bounded organelle	None	Extended
BP	GO:0043603	amide metabolic process	None	Extended
BP	GO:0043604	amide biosynthetic process	None	Extended
BP	GO:0044237	cellular metabolic process	None	Extended
BP	GO:0044238	primary metabolic process	None	Extended
BP	GO:0044249	cellular biosynthetic process	None	Extended
BP	GO:0044271	cellular nitrogen compound biosynthetic process	None	Extended
BP	GO:0071704	organic substance metabolic process	None	Extended
CC	GO:0110165	cellular anatomical entity	None	Extended
BP	GO:1901564	organonitrogen compound metabolic process	None	Extended
BP	GO:1901566	organonitrogen compound biosynthetic process	None	Extended
BP	GO:1901576	organic substance biosynthetic process	None	Extended

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Type	GO Term	Name	Evidence	Source
MF	GO:0004175	endopeptidase activity	IEP	Lactuca Sativa GO terms from Neighborhoods
MF	GO:0004176	ATP-dependent peptidase activity	IEP	Lactuca Sativa GO terms from Neighborhoods
MF	GO:0004252	serine-type endopeptidase activity	IEP	Lactuca Sativa GO terms from Neighborhoods
MF	GO:0004417	hydroxyethylthiazole kinase activity	IEP	Lactuca Sativa GO terms from Neighborhoods
BP	GO:0006508	proteolysis	IEP	Lactuca Sativa GO terms from Neighborhoods
BP	GO:0006766	vitamin metabolic process	IEP	Lactuca Sativa GO terms from Neighborhoods
BP	GO:0006767	water-soluble vitamin metabolic process	IEP	Lactuca Sativa GO terms from Neighborhoods
BP	GO:0006772	thiamine metabolic process	IEP	Lactuca Sativa GO terms from Neighborhoods
MF	GO:0008233	peptidase activity	IEP	Lactuca Sativa GO terms from Neighborhoods
MF	GO:0008236	serine-type peptidase activity	IEP	Lactuca Sativa GO terms from Neighborhoods
BP	GO:0009110	vitamin biosynthetic process	IEP	Lactuca Sativa GO terms from Neighborhoods
BP	GO:0009228	thiamine biosynthetic process	IEP	Lactuca Sativa GO terms from Neighborhoods
MF	GO:0017171	serine hydrolase activity	IEP	Lactuca Sativa GO terms from Neighborhoods
CC	GO:0030126	COPI vesicle coat	IEP	Lactuca Sativa GO terms from Neighborhoods
BP	GO:0030163	protein catabolic process	IEP	Lactuca Sativa GO terms from Neighborhoods
BP	GO:0034308	primary alcohol metabolic process	IEP	Lactuca Sativa GO terms from Neighborhoods
BP	GO:0034309	primary alcohol biosynthetic process	IEP	Lactuca Sativa GO terms from Neighborhoods
BP	GO:0042364	water-soluble vitamin biosynthetic process	IEP	Lactuca Sativa GO terms from Neighborhoods
BP	GO:0042723	thiamine-containing compound metabolic process	IEP	Lactuca Sativa GO terms from Neighborhoods
BP	GO:0042724	thiamine-containing compound biosynthetic process	IEP	Lactuca Sativa GO terms from Neighborhoods
BP	GO:0046165	alcohol biosynthetic process	IEP	Lactuca Sativa GO terms from Neighborhoods
BP	GO:0072527	pyrimidine-containing compound metabolic process	IEP	Lactuca Sativa GO terms from Neighborhoods
BP	GO:0072528	pyrimidine-containing compound biosynthetic process	IEP	Lactuca Sativa GO terms from Neighborhoods
BP	GO:1901617	organic hydroxy compound biosynthetic process	IEP	Lactuca Sativa GO terms from Neighborhoods

InterPro domains	Description	Start	Stop
IPR023573	Ribosomal_eL20_dom	7	82

External Links

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Lsat_1_v5_gn_3_135781.1

Expression Profile

Co-expression Networks

Functional Annotation