Lsat_1_v5_gn_3_133761.1 (AtFAD2, FAD2)

Aliases : AtFAD2, FAD2

Description : delta-12/delta-15 fatty acid desaturase

Gene families : OG0000487 (OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol) Phylogenetic Tree(s): OG0000487_tree

Sequence : coding (download), protein (download)

Attention: This gene has low abundance.

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	Lactuca sativa (Lsa) PCC: Lsat_1_v5_gn_3_133761.1
Cluster	Lactuca sativa (Lsa) Coexpression Clusters (HCCA Algorithm): Cluster_2

Target	Alias	Description	ECC score	Gene Family Method	Actions
Lsat_1_v5_gn_3_133881.1	AtFAD2, FAD2	delta-12/delta-15 fatty acid desaturase	0.09	OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003824	catalytic activity	None	Extended
BP	GO:0006629	lipid metabolic process	IEA	Interproscan
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
MF	GO:0016491	oxidoreductase activity	None	Extended
MF	GO:0016705	oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen	None	Extended
MF	GO:0016717	oxidoreductase activity, acting on paired donors, with oxidation of a pair of donors resulting in the reduction of molecular oxygen to two molecules of water	IEA	Interproscan
BP	GO:0044238	primary metabolic process	None	Extended
BP	GO:0071704	organic substance metabolic process	None	Extended

Type	GO Term	Name	Evidence	Source
MF	GO:0005215	transporter activity	IEP	Lactuca Sativa GO terms from Neighborhoods
MF	GO:0008171	O-methyltransferase activity	IEP	Lactuca Sativa GO terms from Neighborhoods
MF	GO:0022857	transmembrane transporter activity	IEP	Lactuca Sativa GO terms from Neighborhoods
MF	GO:0035673	oligopeptide transmembrane transporter activity	IEP	Lactuca Sativa GO terms from Neighborhoods
MF	GO:0042626	ATPase-coupled transmembrane transporter activity	IEP	Lactuca Sativa GO terms from Neighborhoods
MF	GO:0042887	amide transmembrane transporter activity	IEP	Lactuca Sativa GO terms from Neighborhoods
MF	GO:0140359	ABC-type transporter activity	IEP	Lactuca Sativa GO terms from Neighborhoods
MF	GO:1904680	peptide transmembrane transporter activity	IEP	Lactuca Sativa GO terms from Neighborhoods

InterPro domains	Description	Start	Stop
IPR021863	FAS_N	23	59
IPR005804	FA_desaturase_dom	80	339

External Links

No external refs found!