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  5. Lsat_1_v5_gn_3_121480.1

Lsat_1_v5_gn_3_121480.1 (ECHIB, ECI2, IBR10,...)


Aliases : ECHIB, ECI2, IBR10, ATECI2, PEC12

Description : dodecenoyl-CoA isomerase


Gene families : OG0016217 (OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Lactuca sativa (Lsa) PCC: Lsat_1_v5_gn_3_121480.1
Cluster Lactuca sativa (Lsa) Coexpression Clusters (HCCA Algorithm): Cluster_68


Type GO Term Name Evidence Source
MF GO:0003824 catalytic activity IEA Interproscan
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Type GO Term Name Evidence Source
BP GO:0000375 RNA splicing, via transesterification reactions IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0000377 RNA splicing, via transesterification reactions with bulged adenosine as nucleophile IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0000398 mRNA splicing, via spliceosome IEP Lactuca Sativa GO terms from Neighborhoods
MF GO:0004190 aspartic-type endopeptidase activity IEP Lactuca Sativa GO terms from Neighborhoods
MF GO:0004356 glutamine synthetase activity IEP Lactuca Sativa GO terms from Neighborhoods
MF GO:0005215 transporter activity IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0006082 organic acid metabolic process IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0006397 mRNA processing IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0006541 glutamine metabolic process IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0006542 glutamine biosynthetic process IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0008380 RNA splicing IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0009064 glutamine family amino acid metabolic process IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0009084 glutamine family amino acid biosynthetic process IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0009439 cyanate metabolic process IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0009987 cellular process IEP Lactuca Sativa GO terms from Neighborhoods
MF GO:0016211 ammonia ligase activity IEP Lactuca Sativa GO terms from Neighborhoods
MF GO:0016840 carbon-nitrogen lyase activity IEP Lactuca Sativa GO terms from Neighborhoods
MF GO:0016843 amine-lyase activity IEP Lactuca Sativa GO terms from Neighborhoods
MF GO:0016844 strictosidine synthase activity IEP Lactuca Sativa GO terms from Neighborhoods
MF GO:0016879 ligase activity, forming carbon-nitrogen bonds IEP Lactuca Sativa GO terms from Neighborhoods
MF GO:0016880 acid-ammonia (or amide) ligase activity IEP Lactuca Sativa GO terms from Neighborhoods
MF GO:0022857 transmembrane transporter activity IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0030258 lipid modification IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0030259 lipid glycosylation IEP Lactuca Sativa GO terms from Neighborhoods
CC GO:0030532 small nuclear ribonucleoprotein complex IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0044237 cellular metabolic process IEP Lactuca Sativa GO terms from Neighborhoods
CC GO:0046540 U4/U6 x U5 tri-snRNP complex IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0055085 transmembrane transport IEP Lactuca Sativa GO terms from Neighborhoods
MF GO:0070001 aspartic-type peptidase activity IEP Lactuca Sativa GO terms from Neighborhoods
CC GO:0097525 spliceosomal snRNP complex IEP Lactuca Sativa GO terms from Neighborhoods
CC GO:0097526 spliceosomal tri-snRNP complex IEP Lactuca Sativa GO terms from Neighborhoods
CC GO:0120114 Sm-like protein family complex IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:1901607 alpha-amino acid biosynthetic process IEP Lactuca Sativa GO terms from Neighborhoods
CC GO:1990904 ribonucleoprotein complex IEP Lactuca Sativa GO terms from Neighborhoods
InterPro domains Description Start Stop
IPR001753 Enoyl-CoA_hydra/iso 25 209
No external refs found!