- Species
- Tools
- Expression Profiles
- Compare profiles
- Create heatmap
- Export expression levels
- Expression Specificity
- Compare specificities
- Find specific profiles
- Co-expression Networks
- Create custom network
- Find enriched clusters
- Search
Aliases : JMJ17
Description : not classified
Gene families : OG0000792 (OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol) Phylogenetic Tree(s): OG0000792_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | Lactuca sativa (Lsa) PCC: Lsat_1_v5_gn_3_118140.1 | |
| Cluster | Lactuca sativa (Lsa) Coexpression Clusters (HCCA Algorithm): Cluster_187 |
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| Lsat_1_v5_gn_1_59161.1 | No alias | not classified | 0.02 | OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol | |
| Lsat_1_v5_gn_4_31040.1 | ATPK19, ATS6K2,... | EC_2.7 transferase transferring phosphorus-containing... | 0.02 | OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol | |
| Lsat_1_v5_gn_6_74480.1 | JMJ17 | not classified | 0.02 | OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No GO annotation available for this sequence |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| BP | GO:0000041 | transition metal ion transport | IEP | Lactuca Sativa GO terms from Neighborhoods |
| MF | GO:0003924 | GTPase activity | IEP | Lactuca Sativa GO terms from Neighborhoods |
| MF | GO:0005375 | copper ion transmembrane transporter activity | IEP | Lactuca Sativa GO terms from Neighborhoods |
| BP | GO:0006810 | transport | IEP | Lactuca Sativa GO terms from Neighborhoods |
| BP | GO:0006813 | potassium ion transport | IEP | Lactuca Sativa GO terms from Neighborhoods |
| BP | GO:0006825 | copper ion transport | IEP | Lactuca Sativa GO terms from Neighborhoods |
| CC | GO:0009579 | thylakoid | IEP | Lactuca Sativa GO terms from Neighborhoods |
| BP | GO:0010257 | NADH dehydrogenase complex assembly | IEP | Lactuca Sativa GO terms from Neighborhoods |
| BP | GO:0010258 | NADH dehydrogenase complex (plastoquinone) assembly | IEP | Lactuca Sativa GO terms from Neighborhoods |
| BP | GO:0010275 | NAD(P)H dehydrogenase complex assembly | IEP | Lactuca Sativa GO terms from Neighborhoods |
| MF | GO:0015079 | potassium ion transmembrane transporter activity | IEP | Lactuca Sativa GO terms from Neighborhoods |
| MF | GO:0015267 | channel activity | IEP | Lactuca Sativa GO terms from Neighborhoods |
| MF | GO:0022803 | passive transmembrane transporter activity | IEP | Lactuca Sativa GO terms from Neighborhoods |
| BP | GO:0030001 | metal ion transport | IEP | Lactuca Sativa GO terms from Neighborhoods |
| BP | GO:0034220 | monoatomic ion transmembrane transport | IEP | Lactuca Sativa GO terms from Neighborhoods |
| BP | GO:0035434 | copper ion transmembrane transport | IEP | Lactuca Sativa GO terms from Neighborhoods |
| MF | GO:0046873 | metal ion transmembrane transporter activity | IEP | Lactuca Sativa GO terms from Neighborhoods |
| MF | GO:0046915 | transition metal ion transmembrane transporter activity | IEP | Lactuca Sativa GO terms from Neighborhoods |
| BP | GO:0051179 | localization | IEP | Lactuca Sativa GO terms from Neighborhoods |
| BP | GO:0051234 | establishment of localization | IEP | Lactuca Sativa GO terms from Neighborhoods |
| BP | GO:0071805 | potassium ion transmembrane transport | IEP | Lactuca Sativa GO terms from Neighborhoods |
| BP | GO:0098655 | monoatomic cation transmembrane transport | IEP | Lactuca Sativa GO terms from Neighborhoods |
| BP | GO:0098660 | inorganic ion transmembrane transport | IEP | Lactuca Sativa GO terms from Neighborhoods |
| BP | GO:0098662 | inorganic cation transmembrane transport | IEP | Lactuca Sativa GO terms from Neighborhoods |
No InterPro domains available for this sequence
| No external refs found! |