Lsat_1_v5_gn_3_118060.1 (LRRAC1)

Aliases : LRRAC1

Description : not classified

Gene families : OG0000075 (OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol) Phylogenetic Tree(s): OG0000075_tree

Sequence : coding (download), protein (download)

Attention: This gene has low abundance.

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	Lactuca sativa (Lsa) PCC: Lsat_1_v5_gn_3_118060.1
Cluster	Lactuca sativa (Lsa) Coexpression Clusters (HCCA Algorithm): Cluster_228

Target	Alias	Description	ECC score	Gene Family Method
Lsat_1_v5_gn_3_115800.1	LRRAC1	not classified	0.02	OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol
Lsat_1_v5_gn_3_116300.1	LRRAC1	not classified	0.02	OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol
Lsat_1_v5_gn_3_117560.1	No alias	not classified	0.02	OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol
Lsat_1_v5_gn_3_118161.1	No alias	not classified	0.04	OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol
Lsat_1_v5_gn_3_118260.1	LRRAC1	not classified	0.05	OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol
Lsat_1_v5_gn_3_118420.1	No alias	not classified	0.07	OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol

Type	GO Term	Name	Evidence	Source
MF	GO:0000166	nucleotide binding	None	Extended
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0005488	binding	None	Extended
MF	GO:0017076	purine nucleotide binding	None	Extended
MF	GO:0030554	adenyl nucleotide binding	None	Extended
MF	GO:0032553	ribonucleotide binding	None	Extended
MF	GO:0032555	purine ribonucleotide binding	None	Extended
MF	GO:0032559	adenyl ribonucleotide binding	None	Extended
MF	GO:0036094	small molecule binding	None	Extended
MF	GO:0043167	ion binding	None	Extended
MF	GO:0043168	anion binding	None	Extended
MF	GO:0043531	ADP binding	IEA	Interproscan
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:0097367	carbohydrate derivative binding	None	Extended
MF	GO:1901265	nucleoside phosphate binding	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended

Type	GO Term	Name	Evidence	Source
MF	GO:0000774	adenyl-nucleotide exchange factor activity	IEP	Lactuca Sativa GO terms from Neighborhoods
MF	GO:0003968	RNA-dependent RNA polymerase activity	IEP	Lactuca Sativa GO terms from Neighborhoods
CC	GO:0005694	chromosome	IEP	Lactuca Sativa GO terms from Neighborhoods
BP	GO:0007165	signal transduction	IEP	Lactuca Sativa GO terms from Neighborhoods
CC	GO:0016459	myosin complex	IEP	Lactuca Sativa GO terms from Neighborhoods
MF	GO:0016779	nucleotidyltransferase activity	IEP	Lactuca Sativa GO terms from Neighborhoods
MF	GO:0031072	heat shock protein binding	IEP	Lactuca Sativa GO terms from Neighborhoods
MF	GO:0034062	5'-3' RNA polymerase activity	IEP	Lactuca Sativa GO terms from Neighborhoods
MF	GO:0042802	identical protein binding	IEP	Lactuca Sativa GO terms from Neighborhoods
MF	GO:0042803	protein homodimerization activity	IEP	Lactuca Sativa GO terms from Neighborhoods
MF	GO:0051082	unfolded protein binding	IEP	Lactuca Sativa GO terms from Neighborhoods
MF	GO:0051087	protein-folding chaperone binding	IEP	Lactuca Sativa GO terms from Neighborhoods
MF	GO:0060590	ATPase regulator activity	IEP	Lactuca Sativa GO terms from Neighborhoods
MF	GO:0097747	RNA polymerase activity	IEP	Lactuca Sativa GO terms from Neighborhoods
MF	GO:0140098	catalytic activity, acting on RNA	IEP	Lactuca Sativa GO terms from Neighborhoods

InterPro domains	Description	Start	Stop
IPR041118	Rx_N	5	93
IPR002182	NB-ARC	208	303

External Links

No external refs found!