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  5. Lsat_1_v5_gn_3_117560.1

Lsat_1_v5_gn_3_117560.1


Description : not classified


Gene families : OG0000075 (OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol) Phylogenetic Tree(s): OG0000075_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Lactuca sativa (Lsa) PCC: Lsat_1_v5_gn_3_117560.1
Cluster Lactuca sativa (Lsa) Coexpression Clusters (HCCA Algorithm): Cluster_30

Target Alias Description ECC score Gene Family Method Actions
Lsat_1_v5_gn_3_118060.1 LRRAC1 not classified 0.02 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol
Lsat_1_v5_gn_3_118420.1 No alias not classified 0.02 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol

Type GO Term Name Evidence Source
MF GO:0008168 methyltransferase activity IEA Interproscan
MF GO:0043531 ADP binding IEA Interproscan
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Type GO Term Name Evidence Source
CC GO:0000159 protein phosphatase type 2A complex IEP Lactuca Sativa GO terms from Neighborhoods
CC GO:0005856 cytoskeleton IEP Lactuca Sativa GO terms from Neighborhoods
CC GO:0005885 Arp2/3 protein complex IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0006479 protein methylation IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0007015 actin filament organization IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0007165 signal transduction IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0008213 protein alkylation IEP Lactuca Sativa GO terms from Neighborhoods
CC GO:0008287 protein serine/threonine phosphatase complex IEP Lactuca Sativa GO terms from Neighborhoods
CC GO:0015629 actin cytoskeleton IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0016571 histone methylation IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0018022 peptidyl-lysine methylation IEP Lactuca Sativa GO terms from Neighborhoods
MF GO:0018024 obsolete histone lysine N-methyltransferase activity IEP Lactuca Sativa GO terms from Neighborhoods
MF GO:0019208 phosphatase regulator activity IEP Lactuca Sativa GO terms from Neighborhoods
MF GO:0019888 protein phosphatase regulator activity IEP Lactuca Sativa GO terms from Neighborhoods
MF GO:0030234 enzyme regulator activity IEP Lactuca Sativa GO terms from Neighborhoods
MF GO:0030976 thiamine pyrophosphate binding IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0034314 Arp2/3 complex-mediated actin nucleation IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0034968 histone lysine methylation IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0045010 actin nucleation IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0050789 regulation of biological process IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0050794 regulation of cellular process IEP Lactuca Sativa GO terms from Neighborhoods
MF GO:0050997 quaternary ammonium group binding IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0065007 biological regulation IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0097435 supramolecular fiber organization IEP Lactuca Sativa GO terms from Neighborhoods
MF GO:0098772 molecular function regulator activity IEP Lactuca Sativa GO terms from Neighborhoods
CC GO:1902494 catalytic complex IEP Lactuca Sativa GO terms from Neighborhoods
CC GO:1903293 phosphatase complex IEP Lactuca Sativa GO terms from Neighborhoods
InterPro domains Description Start Stop
IPR041118 Rx_N 5 99
IPR004159 Put_SAM_MeTrfase 1264 1470
IPR002182 NB-ARC 171 394
No external refs found!