Bra005053 (JAL22)


Aliases : JAL22

Description : not classified


Gene families : OG0002768 (OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol) Phylogenetic Tree(s): OG0002768_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Brassica rapa (Bra) PCC: Bra005053
Cluster Brassica rapa (Bra) Coexpression Clusters (HCCA Algorithm): Cluster_1

Target Alias Description ECC score Gene Family Method Actions
Bra000129 JAL22 not classified 0.02 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source
MF GO:0003682 chromatin binding IEP Brassica rapa GO terms from Neighborhoods
MF GO:0005199 structural constituent of cell wall IEP Brassica rapa GO terms from Neighborhoods
BP GO:0009664 plant-type cell wall organization IEP Brassica rapa GO terms from Neighborhoods
MF GO:0015291 secondary active transmembrane transporter activity IEP Brassica rapa GO terms from Neighborhoods
MF GO:0015297 antiporter activity IEP Brassica rapa GO terms from Neighborhoods
MF GO:0016702 oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of two atoms of oxygen IEP Brassica rapa GO terms from Neighborhoods
MF GO:0022804 active transmembrane transporter activity IEP Brassica rapa GO terms from Neighborhoods
MF GO:0042910 xenobiotic transmembrane transporter activity IEP Brassica rapa GO terms from Neighborhoods
MF GO:0043021 ribonucleoprotein complex binding IEP Brassica rapa GO terms from Neighborhoods
MF GO:0043022 ribosome binding IEP Brassica rapa GO terms from Neighborhoods
MF GO:0043565 sequence-specific DNA binding IEP Brassica rapa GO terms from Neighborhoods
MF GO:0044877 protein-containing complex binding IEP Brassica rapa GO terms from Neighborhoods
BP GO:0050789 regulation of biological process IEP Brassica rapa GO terms from Neighborhoods
BP GO:0050794 regulation of cellular process IEP Brassica rapa GO terms from Neighborhoods
MF GO:0051213 dioxygenase activity IEP Brassica rapa GO terms from Neighborhoods
BP GO:0071669 plant-type cell wall organization or biogenesis IEP Brassica rapa GO terms from Neighborhoods
InterPro domains Description Start Stop
IPR001229 Jacalin-like_lectin_dom 173 301
IPR001229 Jacalin-like_lectin_dom 13 149
IPR001229 Jacalin-like_lectin_dom 322 453
No external refs found!