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  5. Lsat_1_v5_gn_3_111940.1

Lsat_1_v5_gn_3_111940.1 (HGML)


Aliases : HGML

Description : hydroxymethylglutaryl-CoA lyase. EC_4.1 carbon-carbon lyase


Gene families : OG0008896 (OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Lactuca sativa (Lsa) PCC: Lsat_1_v5_gn_3_111940.1
Cluster Lactuca sativa (Lsa) Coexpression Clusters (HCCA Algorithm): Cluster_31


Type GO Term Name Evidence Source
MF GO:0003824 catalytic activity IEA Interproscan
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Type GO Term Name Evidence Source
BP GO:0000272 polysaccharide catabolic process IEP Lactuca Sativa GO terms from Neighborhoods
MF GO:0004497 monooxygenase activity IEP Lactuca Sativa GO terms from Neighborhoods
MF GO:0004751 ribose-5-phosphate isomerase activity IEP Lactuca Sativa GO terms from Neighborhoods
MF GO:0005215 transporter activity IEP Lactuca Sativa GO terms from Neighborhoods
MF GO:0005506 iron ion binding IEP Lactuca Sativa GO terms from Neighborhoods
CC GO:0005741 mitochondrial outer membrane IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0005985 sucrose metabolic process IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0006081 cellular aldehyde metabolic process IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0006810 transport IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0009052 pentose-phosphate shunt, non-oxidative branch IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0009057 macromolecule catabolic process IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0009240 isopentenyl diphosphate biosynthetic process IEP Lactuca Sativa GO terms from Neighborhoods
MF GO:0015267 channel activity IEP Lactuca Sativa GO terms from Neighborhoods
CC GO:0016020 membrane IEP Lactuca Sativa GO terms from Neighborhoods
MF GO:0016157 sucrose synthase activity IEP Lactuca Sativa GO terms from Neighborhoods
MF GO:0016160 amylase activity IEP Lactuca Sativa GO terms from Neighborhoods
MF GO:0016161 beta-amylase activity IEP Lactuca Sativa GO terms from Neighborhoods
MF GO:0016705 oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen IEP Lactuca Sativa GO terms from Neighborhoods
MF GO:0016725 oxidoreductase activity, acting on CH or CH2 groups IEP Lactuca Sativa GO terms from Neighborhoods
MF GO:0016726 oxidoreductase activity, acting on CH or CH2 groups, NAD or NADP as acceptor IEP Lactuca Sativa GO terms from Neighborhoods
MF GO:0016868 intramolecular transferase activity, phosphotransferases IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0019288 isopentenyl diphosphate biosynthetic process, methylerythritol 4-phosphate pathway IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0019682 glyceraldehyde-3-phosphate metabolic process IEP Lactuca Sativa GO terms from Neighborhoods
CC GO:0019867 outer membrane IEP Lactuca Sativa GO terms from Neighborhoods
MF GO:0020037 heme binding IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0022607 cellular component assembly IEP Lactuca Sativa GO terms from Neighborhoods
MF GO:0022803 passive transmembrane transporter activity IEP Lactuca Sativa GO terms from Neighborhoods
MF GO:0022857 transmembrane transporter activity IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0030163 protein catabolic process IEP Lactuca Sativa GO terms from Neighborhoods
CC GO:0031968 organelle outer membrane IEP Lactuca Sativa GO terms from Neighborhoods
MF GO:0043169 cation binding IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0043933 protein-containing complex organization IEP Lactuca Sativa GO terms from Neighborhoods
MF GO:0044183 protein folding chaperone IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0046490 isopentenyl diphosphate metabolic process IEP Lactuca Sativa GO terms from Neighborhoods
MF GO:0046872 metal ion binding IEP Lactuca Sativa GO terms from Neighborhoods
MF GO:0046906 tetrapyrrole binding IEP Lactuca Sativa GO terms from Neighborhoods
MF GO:0046914 transition metal ion binding IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0050992 dimethylallyl diphosphate biosynthetic process IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0050993 dimethylallyl diphosphate metabolic process IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0051179 localization IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0051234 establishment of localization IEP Lactuca Sativa GO terms from Neighborhoods
MF GO:0051745 4-hydroxy-3-methylbut-2-en-1-yl diphosphate reductase activity IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0055085 transmembrane transport IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0065003 protein-containing complex assembly IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0110102 ribulose bisphosphate carboxylase complex assembly IEP Lactuca Sativa GO terms from Neighborhoods
MF GO:2001070 starch binding IEP Lactuca Sativa GO terms from Neighborhoods
InterPro domains Description Start Stop
IPR000891 PYR_CT 131 404
No external refs found!