Bra005036 (ABCB6, PGP6)

Aliases : ABCB6, PGP6

Description : subfamily ABCB transporter

Gene families : OG0006378 (OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)

Attention: This gene has low abundance.

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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	Brassica rapa (Bra) PCC: Bra005036
Cluster	Brassica rapa (Bra) Coexpression Clusters (HCCA Algorithm): Cluster_252

Type	GO Term	Name	Evidence	Source
MF	GO:0000166	nucleotide binding	None	Extended
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0005215	transporter activity	None	Extended
MF	GO:0005488	binding	None	Extended
MF	GO:0005524	ATP binding	IEA	Interproscan
CC	GO:0005575	cellular_component	None	Extended
BP	GO:0006810	transport	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0009987	cellular process	None	Extended
MF	GO:0015399	primary active transmembrane transporter activity	None	Extended
CC	GO:0016020	membrane	IEA	Interproscan
MF	GO:0017076	purine nucleotide binding	None	Extended
MF	GO:0022804	active transmembrane transporter activity	None	Extended
MF	GO:0022857	transmembrane transporter activity	None	Extended
MF	GO:0030554	adenyl nucleotide binding	None	Extended
MF	GO:0032553	ribonucleotide binding	None	Extended
MF	GO:0032555	purine ribonucleotide binding	None	Extended
MF	GO:0032559	adenyl ribonucleotide binding	None	Extended
MF	GO:0035639	purine ribonucleoside triphosphate binding	None	Extended
MF	GO:0036094	small molecule binding	None	Extended
MF	GO:0042626	ATPase-coupled transmembrane transporter activity	None	Extended
MF	GO:0043167	ion binding	None	Extended
MF	GO:0043168	anion binding	None	Extended
BP	GO:0051179	localization	None	Extended
BP	GO:0051234	establishment of localization	None	Extended
BP	GO:0055085	transmembrane transport	IEA	Interproscan
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:0097367	carbohydrate derivative binding	None	Extended
CC	GO:0110165	cellular anatomical entity	None	Extended
MF	GO:0140359	ABC-type transporter activity	IEA	Interproscan
MF	GO:0140657	ATP-dependent activity	None	Extended
MF	GO:1901265	nucleoside phosphate binding	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended

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Type	GO Term	Name	Evidence	Source
CC	GO:0000148	1,3-beta-D-glucan synthase complex	IEP	Brassica rapa GO terms from Neighborhoods
MF	GO:0000295	adenine nucleotide transmembrane transporter activity	IEP	Brassica rapa GO terms from Neighborhoods
MF	GO:0003843	1,3-beta-D-glucan synthase activity	IEP	Brassica rapa GO terms from Neighborhoods
MF	GO:0003924	GTPase activity	IEP	Brassica rapa GO terms from Neighborhoods
MF	GO:0004559	alpha-mannosidase activity	IEP	Brassica rapa GO terms from Neighborhoods
MF	GO:0004571	mannosyl-oligosaccharide 1,2-alpha-mannosidase activity	IEP	Brassica rapa GO terms from Neighborhoods
MF	GO:0005346	purine ribonucleotide transmembrane transporter activity	IEP	Brassica rapa GO terms from Neighborhoods
MF	GO:0005347	ATP transmembrane transporter activity	IEP	Brassica rapa GO terms from Neighborhoods
MF	GO:0005471	ATP:ADP antiporter activity	IEP	Brassica rapa GO terms from Neighborhoods
MF	GO:0005515	protein binding	IEP	Brassica rapa GO terms from Neighborhoods
CC	GO:0005801	cis-Golgi network	IEP	Brassica rapa GO terms from Neighborhoods
BP	GO:0006074	(1->3)-beta-D-glucan metabolic process	IEP	Brassica rapa GO terms from Neighborhoods
BP	GO:0006075	(1->3)-beta-D-glucan biosynthetic process	IEP	Brassica rapa GO terms from Neighborhoods
BP	GO:0006862	nucleotide transport	IEP	Brassica rapa GO terms from Neighborhoods
MF	GO:0008270	zinc ion binding	IEP	Brassica rapa GO terms from Neighborhoods
MF	GO:0008514	organic anion transmembrane transporter activity	IEP	Brassica rapa GO terms from Neighborhoods
BP	GO:0008608	attachment of spindle microtubules to kinetochore	IEP	Brassica rapa GO terms from Neighborhoods
MF	GO:0015215	nucleotide transmembrane transporter activity	IEP	Brassica rapa GO terms from Neighborhoods
MF	GO:0015216	purine nucleotide transmembrane transporter activity	IEP	Brassica rapa GO terms from Neighborhoods
MF	GO:0015217	ADP transmembrane transporter activity	IEP	Brassica rapa GO terms from Neighborhoods
MF	GO:0015605	organophosphate ester transmembrane transporter activity	IEP	Brassica rapa GO terms from Neighborhoods
BP	GO:0015748	organophosphate ester transport	IEP	Brassica rapa GO terms from Neighborhoods
MF	GO:0015923	mannosidase activity	IEP	Brassica rapa GO terms from Neighborhoods
MF	GO:0015924	mannosyl-oligosaccharide mannosidase activity	IEP	Brassica rapa GO terms from Neighborhoods
BP	GO:0015931	nucleobase-containing compound transport	IEP	Brassica rapa GO terms from Neighborhoods
MF	GO:0015932	nucleobase-containing compound transmembrane transporter activity	IEP	Brassica rapa GO terms from Neighborhoods
BP	GO:0022402	cell cycle process	IEP	Brassica rapa GO terms from Neighborhoods
CC	GO:0031262	Ndc80 complex	IEP	Brassica rapa GO terms from Neighborhoods
BP	GO:0051315	attachment of mitotic spindle microtubules to kinetochore	IEP	Brassica rapa GO terms from Neighborhoods
BP	GO:0071702	organic substance transport	IEP	Brassica rapa GO terms from Neighborhoods
BP	GO:0071705	nitrogen compound transport	IEP	Brassica rapa GO terms from Neighborhoods
CC	GO:0098797	plasma membrane protein complex	IEP	Brassica rapa GO terms from Neighborhoods
CC	GO:0180019	Knl1/Spc105 complex	IEP	Brassica rapa GO terms from Neighborhoods
MF	GO:1901505	carbohydrate derivative transmembrane transporter activity	IEP	Brassica rapa GO terms from Neighborhoods
BP	GO:1903047	mitotic cell cycle process	IEP	Brassica rapa GO terms from Neighborhoods

InterPro domains	Description	Start	Stop
IPR011527	ABC1_TM_dom	842	1106
IPR011527	ABC1_TM_dom	89	363
IPR003439	ABC_transporter-like_ATP-bd	434	578
IPR003439	ABC_transporter-like_ATP-bd	1177	1325

External Links

No external refs found!

Bra005036 (ABCB6, PGP6)

Expression Profile

Co-expression Networks

Functional Annotation