Bra005025 (ATEXPA4, XPA4,...)


Aliases : ATEXPA4, XPA4, ATEXP4, EXPA4, ATHEXP ALPHA 1.6

Description : alpha-class expansin


Gene families : OG0002750 (OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol) Phylogenetic Tree(s): OG0002750_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Brassica rapa (Bra) PCC: Bra005025
Cluster Brassica rapa (Bra) Coexpression Clusters (HCCA Algorithm): Cluster_112


Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source
CC GO:0000786 nucleosome IEP Brassica rapa GO terms from Neighborhoods
MF GO:0003682 chromatin binding IEP Brassica rapa GO terms from Neighborhoods
MF GO:0004017 adenylate kinase activity IEP Brassica rapa GO terms from Neighborhoods
MF GO:0004525 ribonuclease III activity IEP Brassica rapa GO terms from Neighborhoods
CC GO:0005618 cell wall IEP Brassica rapa GO terms from Neighborhoods
BP GO:0006073 obsolete cellular glucan metabolic process IEP Brassica rapa GO terms from Neighborhoods
BP GO:0006325 chromatin organization IEP Brassica rapa GO terms from Neighborhoods
BP GO:0006334 nucleosome assembly IEP Brassica rapa GO terms from Neighborhoods
BP GO:0006338 chromatin remodeling IEP Brassica rapa GO terms from Neighborhoods
MF GO:0016762 xyloglucan:xyloglucosyl transferase activity IEP Brassica rapa GO terms from Neighborhoods
MF GO:0016776 phosphotransferase activity, phosphate group as acceptor IEP Brassica rapa GO terms from Neighborhoods
MF GO:0016891 RNA endonuclease activity, producing 5'-phosphomonoesters IEP Brassica rapa GO terms from Neighborhoods
MF GO:0016893 endonuclease activity, active with either ribo- or deoxyribonucleic acids and producing 5'-phosphomonoesters IEP Brassica rapa GO terms from Neighborhoods
MF GO:0019205 nucleobase-containing compound kinase activity IEP Brassica rapa GO terms from Neighborhoods
MF GO:0032296 double-stranded RNA-specific ribonuclease activity IEP Brassica rapa GO terms from Neighborhoods
CC GO:0032993 protein-DNA complex IEP Brassica rapa GO terms from Neighborhoods
BP GO:0034728 nucleosome organization IEP Brassica rapa GO terms from Neighborhoods
CC GO:0048046 apoplast IEP Brassica rapa GO terms from Neighborhoods
MF GO:0050145 nucleoside monophosphate kinase activity IEP Brassica rapa GO terms from Neighborhoods
BP GO:0065004 protein-DNA complex assembly IEP Brassica rapa GO terms from Neighborhoods
BP GO:0071824 protein-DNA complex organization IEP Brassica rapa GO terms from Neighborhoods
InterPro domains Description Start Stop
IPR009009 RlpA-like_DPBB 65 152
IPR007117 Expansin_CBD 163 240
No external refs found!