Lsat_1_v5_gn_2_940.1 (QRT1)

Aliases : QRT1

Description : not classified

Gene families : OG0000291 (OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol) Phylogenetic Tree(s): OG0000291_tree

Sequence : coding (download), protein (download)

Attention: This gene has low abundance.

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	Lactuca sativa (Lsa) PCC: Lsat_1_v5_gn_2_940.1
Cluster	Lactuca sativa (Lsa) Coexpression Clusters (HCCA Algorithm): Cluster_123

Target	Alias	Description	ECC score	Gene Family Method	Actions
Lsat_1_v5_gn_2_1100.1	No alias	not classified	0.09	OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol
Lsat_1_v5_gn_2_340.1	No alias	not classified	0.03	OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol

Type	GO Term	Name	Evidence	Source
MF	GO:0000166	nucleotide binding	None	Extended
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0005488	binding	None	Extended
MF	GO:0017076	purine nucleotide binding	None	Extended
MF	GO:0030554	adenyl nucleotide binding	None	Extended
MF	GO:0032553	ribonucleotide binding	None	Extended
MF	GO:0032555	purine ribonucleotide binding	None	Extended
MF	GO:0032559	adenyl ribonucleotide binding	None	Extended
MF	GO:0036094	small molecule binding	None	Extended
MF	GO:0043167	ion binding	None	Extended
MF	GO:0043168	anion binding	None	Extended
MF	GO:0043531	ADP binding	IEA	Interproscan
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:0097367	carbohydrate derivative binding	None	Extended
MF	GO:1901265	nucleoside phosphate binding	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended

Type	GO Term	Name	Evidence	Source
CC	GO:0000123	histone acetyltransferase complex	IEP	Lactuca Sativa GO terms from Neighborhoods
CC	GO:0005777	peroxisome	IEP	Lactuca Sativa GO terms from Neighborhoods
BP	GO:0007031	peroxisome organization	IEP	Lactuca Sativa GO terms from Neighborhoods
BP	GO:0007165	signal transduction	IEP	Lactuca Sativa GO terms from Neighborhoods
CC	GO:0031248	protein acetyltransferase complex	IEP	Lactuca Sativa GO terms from Neighborhoods
CC	GO:0042579	microbody	IEP	Lactuca Sativa GO terms from Neighborhoods
CC	GO:0070461	SAGA-type complex	IEP	Lactuca Sativa GO terms from Neighborhoods
CC	GO:1902493	acetyltransferase complex	IEP	Lactuca Sativa GO terms from Neighborhoods

InterPro domains	Description	Start	Stop
IPR002182	NB-ARC	157	396

External Links

No external refs found!