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  5. Lsat_1_v5_gn_2_91621.1

Lsat_1_v5_gn_2_91621.1 (IRP6, RH14, DRH1, ATDRH1)


Aliases : IRP6, RH14, DRH1, ATDRH1

Description : not classified


Gene families : OG0009140 (OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Lactuca sativa (Lsa) PCC: Lsat_1_v5_gn_2_91621.1
Cluster Lactuca sativa (Lsa) Coexpression Clusters (HCCA Algorithm): Cluster_135


Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEA Interproscan
MF GO:0005524 ATP binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003677 DNA binding IEP Lactuca Sativa GO terms from Neighborhoods
MF GO:0003968 RNA-dependent RNA polymerase activity IEP Lactuca Sativa GO terms from Neighborhoods
MF GO:0004672 protein kinase activity IEP Lactuca Sativa GO terms from Neighborhoods
MF GO:0005085 guanyl-nucleotide exchange factor activity IEP Lactuca Sativa GO terms from Neighborhoods
MF GO:0005515 protein binding IEP Lactuca Sativa GO terms from Neighborhoods
CC GO:0005694 chromosome IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0006468 protein phosphorylation IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0006793 phosphorus metabolic process IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0006796 phosphate-containing compound metabolic process IEP Lactuca Sativa GO terms from Neighborhoods
MF GO:0008373 sialyltransferase activity IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0009606 tropism IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0010274 hydrotropism IEP Lactuca Sativa GO terms from Neighborhoods
MF GO:0015399 primary active transmembrane transporter activity IEP Lactuca Sativa GO terms from Neighborhoods
MF GO:0016301 kinase activity IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0016310 phosphorylation IEP Lactuca Sativa GO terms from Neighborhoods
MF GO:0016740 transferase activity IEP Lactuca Sativa GO terms from Neighborhoods
MF GO:0016772 transferase activity, transferring phosphorus-containing groups IEP Lactuca Sativa GO terms from Neighborhoods
MF GO:0016773 phosphotransferase activity, alcohol group as acceptor IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0019538 protein metabolic process IEP Lactuca Sativa GO terms from Neighborhoods
MF GO:0022804 active transmembrane transporter activity IEP Lactuca Sativa GO terms from Neighborhoods
MF GO:0030695 GTPase regulator activity IEP Lactuca Sativa GO terms from Neighborhoods
MF GO:0031625 ubiquitin protein ligase binding IEP Lactuca Sativa GO terms from Neighborhoods
MF GO:0034062 5'-3' RNA polymerase activity IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0036211 protein modification process IEP Lactuca Sativa GO terms from Neighborhoods
MF GO:0042626 ATPase-coupled transmembrane transporter activity IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0043412 macromolecule modification IEP Lactuca Sativa GO terms from Neighborhoods
MF GO:0044389 ubiquitin-like protein ligase binding IEP Lactuca Sativa GO terms from Neighborhoods
MF GO:0051087 protein-folding chaperone binding IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0055085 transmembrane transport IEP Lactuca Sativa GO terms from Neighborhoods
MF GO:0060589 nucleoside-triphosphatase regulator activity IEP Lactuca Sativa GO terms from Neighborhoods
MF GO:0097747 RNA polymerase activity IEP Lactuca Sativa GO terms from Neighborhoods
MF GO:0140359 ABC-type transporter activity IEP Lactuca Sativa GO terms from Neighborhoods
InterPro domains Description Start Stop
IPR001650 Helicase_C 393 501
IPR011545 DEAD/DEAH_box_helicase_dom 186 356
No external refs found!