Lsat_1_v5_gn_2_86901.1 (ATDOF2.4, DOF2.4, PEAR1)

Aliases : ATDOF2.4, DOF2.4, PEAR1

Description : transcription factor *(DOF)

Gene families : OG0001429 (OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol) Phylogenetic Tree(s): OG0001429_tree

Sequence : coding (download), protein (download)

Attention: This gene has low abundance.

Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	Lactuca sativa (Lsa) PCC: Lsat_1_v5_gn_2_86901.1
Cluster	Lactuca sativa (Lsa) Coexpression Clusters (HCCA Algorithm): Cluster_76

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003676	nucleic acid binding	None	Extended
MF	GO:0003677	DNA binding	IEA	Interproscan
MF	GO:0005488	binding	None	Extended
BP	GO:0006355	regulation of DNA-templated transcription	IEA	Interproscan
BP	GO:0008150	biological_process	None	Extended
BP	GO:0009889	regulation of biosynthetic process	None	Extended
BP	GO:0010468	regulation of gene expression	None	Extended
BP	GO:0010556	regulation of macromolecule biosynthetic process	None	Extended
BP	GO:0019219	regulation of nucleobase-containing compound metabolic process	None	Extended
BP	GO:0019222	regulation of metabolic process	None	Extended
BP	GO:0031323	regulation of cellular metabolic process	None	Extended
BP	GO:0031326	regulation of cellular biosynthetic process	None	Extended
BP	GO:0050789	regulation of biological process	None	Extended
BP	GO:0050794	regulation of cellular process	None	Extended
BP	GO:0051171	regulation of nitrogen compound metabolic process	None	Extended
BP	GO:0051252	regulation of RNA metabolic process	None	Extended
BP	GO:0060255	regulation of macromolecule metabolic process	None	Extended
BP	GO:0065007	biological regulation	None	Extended
BP	GO:0080090	regulation of primary metabolic process	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended
BP	GO:2001141	regulation of RNA biosynthetic process	None	Extended

Toggle parental

Type	GO Term	Name	Evidence	Source
BP	GO:0001101	response to acid chemical	IEP	Lactuca Sativa GO terms from Neighborhoods
MF	GO:0004097	catechol oxidase activity	IEP	Lactuca Sativa GO terms from Neighborhoods
MF	GO:0004420	hydroxymethylglutaryl-CoA reductase (NADPH) activity	IEP	Lactuca Sativa GO terms from Neighborhoods
MF	GO:0005544	calcium-dependent phospholipid binding	IEP	Lactuca Sativa GO terms from Neighborhoods
CC	GO:0005634	nucleus	IEP	Lactuca Sativa GO terms from Neighborhoods
CC	GO:0005694	chromosome	IEP	Lactuca Sativa GO terms from Neighborhoods
BP	GO:0006721	terpenoid metabolic process	IEP	Lactuca Sativa GO terms from Neighborhoods
MF	GO:0008131	primary amine oxidase activity	IEP	Lactuca Sativa GO terms from Neighborhoods
BP	GO:0008299	isoprenoid biosynthetic process	IEP	Lactuca Sativa GO terms from Neighborhoods
MF	GO:0008661	1-deoxy-D-xylulose-5-phosphate synthase activity	IEP	Lactuca Sativa GO terms from Neighborhoods
MF	GO:0009055	electron transfer activity	IEP	Lactuca Sativa GO terms from Neighborhoods
BP	GO:0009415	response to water	IEP	Lactuca Sativa GO terms from Neighborhoods
BP	GO:0009719	response to endogenous stimulus	IEP	Lactuca Sativa GO terms from Neighborhoods
BP	GO:0009725	response to hormone	IEP	Lactuca Sativa GO terms from Neighborhoods
BP	GO:0010033	response to organic substance	IEP	Lactuca Sativa GO terms from Neighborhoods
BP	GO:0015936	coenzyme A metabolic process	IEP	Lactuca Sativa GO terms from Neighborhoods
BP	GO:0016114	terpenoid biosynthetic process	IEP	Lactuca Sativa GO terms from Neighborhoods
MF	GO:0016638	oxidoreductase activity, acting on the CH-NH2 group of donors	IEP	Lactuca Sativa GO terms from Neighborhoods
MF	GO:0016641	oxidoreductase activity, acting on the CH-NH2 group of donors, oxygen as acceptor	IEP	Lactuca Sativa GO terms from Neighborhoods
MF	GO:0016682	oxidoreductase activity, acting on diphenols and related substances as donors, oxygen as acceptor	IEP	Lactuca Sativa GO terms from Neighborhoods
MF	GO:0016744	transketolase or transaldolase activity	IEP	Lactuca Sativa GO terms from Neighborhoods
BP	GO:0019915	lipid storage	IEP	Lactuca Sativa GO terms from Neighborhoods
BP	GO:0033865	nucleoside bisphosphate metabolic process	IEP	Lactuca Sativa GO terms from Neighborhoods
BP	GO:0033875	ribonucleoside bisphosphate metabolic process	IEP	Lactuca Sativa GO terms from Neighborhoods
BP	GO:0034032	purine nucleoside bisphosphate metabolic process	IEP	Lactuca Sativa GO terms from Neighborhoods
BP	GO:0042221	response to chemical	IEP	Lactuca Sativa GO terms from Neighborhoods
CC	GO:0043227	membrane-bounded organelle	IEP	Lactuca Sativa GO terms from Neighborhoods
CC	GO:0043231	intracellular membrane-bounded organelle	IEP	Lactuca Sativa GO terms from Neighborhoods
BP	GO:0044030	regulation of DNA methylation	IEP	Lactuca Sativa GO terms from Neighborhoods
BP	GO:0050896	response to stimulus	IEP	Lactuca Sativa GO terms from Neighborhoods
BP	GO:0051052	regulation of DNA metabolic process	IEP	Lactuca Sativa GO terms from Neighborhoods
BP	GO:0051235	maintenance of location	IEP	Lactuca Sativa GO terms from Neighborhoods
MF	GO:0070403	NAD+ binding	IEP	Lactuca Sativa GO terms from Neighborhoods
CC	GO:0110165	cellular anatomical entity	IEP	Lactuca Sativa GO terms from Neighborhoods
BP	GO:1901700	response to oxygen-containing compound	IEP	Lactuca Sativa GO terms from Neighborhoods
BP	GO:1902074	response to salt	IEP	Lactuca Sativa GO terms from Neighborhoods

InterPro domains	Description	Start	Stop
IPR003851	Znf_Dof	42	96

External Links

No external refs found!

Lsat_1_v5_gn_2_86901.1 (ATDOF2.4, DOF2.4, PEAR1)

Expression Profile

Co-expression Networks

Functional Annotation