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Description : not classified
Gene families : OG0005257 (OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol) Phylogenetic Tree(s): OG0005257_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | Lactuca sativa (Lsa) PCC: Lsat_1_v5_gn_2_84180.1 | |
| Cluster | Lactuca sativa (Lsa) Coexpression Clusters (HCCA Algorithm): Cluster_191 |
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| Lsat_1_v5_gn_5_141221.1 | ELF8, NRF2, VIP6 | component *(VIP6/CTR9) of PAF1C transcription initiation... | 0.02 | OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol | |
| Spov3_chr5.02637 | ELF8, NRF2, VIP6 | component *(VIP6/CTR9) of PAF1C transcription initiation... | 0.01 | OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No GO annotation available for this sequence |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| CC | GO:0000139 | Golgi membrane | IEP | Lactuca Sativa GO terms from Neighborhoods |
| MF | GO:0003676 | nucleic acid binding | IEP | Lactuca Sativa GO terms from Neighborhoods |
| MF | GO:0003684 | damaged DNA binding | IEP | Lactuca Sativa GO terms from Neighborhoods |
| MF | GO:0003723 | RNA binding | IEP | Lactuca Sativa GO terms from Neighborhoods |
| MF | GO:0003950 | NAD+ ADP-ribosyltransferase activity | IEP | Lactuca Sativa GO terms from Neighborhoods |
| MF | GO:0003968 | RNA-dependent RNA polymerase activity | IEP | Lactuca Sativa GO terms from Neighborhoods |
| MF | GO:0005049 | nuclear export signal receptor activity | IEP | Lactuca Sativa GO terms from Neighborhoods |
| MF | GO:0005488 | binding | IEP | Lactuca Sativa GO terms from Neighborhoods |
| MF | GO:0005515 | protein binding | IEP | Lactuca Sativa GO terms from Neighborhoods |
| MF | GO:0005524 | ATP binding | IEP | Lactuca Sativa GO terms from Neighborhoods |
| CC | GO:0005783 | endoplasmic reticulum | IEP | Lactuca Sativa GO terms from Neighborhoods |
| BP | GO:0006357 | regulation of transcription by RNA polymerase II | IEP | Lactuca Sativa GO terms from Neighborhoods |
| BP | GO:0006366 | transcription by RNA polymerase II | IEP | Lactuca Sativa GO terms from Neighborhoods |
| BP | GO:0006606 | protein import into nucleus | IEP | Lactuca Sativa GO terms from Neighborhoods |
| BP | GO:0006810 | transport | IEP | Lactuca Sativa GO terms from Neighborhoods |
| BP | GO:0006874 | intracellular calcium ion homeostasis | IEP | Lactuca Sativa GO terms from Neighborhoods |
| BP | GO:0006886 | intracellular protein transport | IEP | Lactuca Sativa GO terms from Neighborhoods |
| BP | GO:0006890 | retrograde vesicle-mediated transport, Golgi to endoplasmic reticulum | IEP | Lactuca Sativa GO terms from Neighborhoods |
| BP | GO:0006891 | intra-Golgi vesicle-mediated transport | IEP | Lactuca Sativa GO terms from Neighborhoods |
| BP | GO:0006913 | nucleocytoplasmic transport | IEP | Lactuca Sativa GO terms from Neighborhoods |
| MF | GO:0008094 | ATP-dependent activity, acting on DNA | IEP | Lactuca Sativa GO terms from Neighborhoods |
| BP | GO:0008104 | protein localization | IEP | Lactuca Sativa GO terms from Neighborhoods |
| MF | GO:0008270 | zinc ion binding | IEP | Lactuca Sativa GO terms from Neighborhoods |
| BP | GO:0010921 | regulation of phosphatase activity | IEP | Lactuca Sativa GO terms from Neighborhoods |
| BP | GO:0015031 | protein transport | IEP | Lactuca Sativa GO terms from Neighborhoods |
| BP | GO:0016192 | vesicle-mediated transport | IEP | Lactuca Sativa GO terms from Neighborhoods |
| CC | GO:0016592 | mediator complex | IEP | Lactuca Sativa GO terms from Neighborhoods |
| MF | GO:0016763 | pentosyltransferase activity | IEP | Lactuca Sativa GO terms from Neighborhoods |
| MF | GO:0016772 | transferase activity, transferring phosphorus-containing groups | IEP | Lactuca Sativa GO terms from Neighborhoods |
| MF | GO:0016779 | nucleotidyltransferase activity | IEP | Lactuca Sativa GO terms from Neighborhoods |
| MF | GO:0019899 | enzyme binding | IEP | Lactuca Sativa GO terms from Neighborhoods |
| MF | GO:0019902 | phosphatase binding | IEP | Lactuca Sativa GO terms from Neighborhoods |
| MF | GO:0019903 | protein phosphatase binding | IEP | Lactuca Sativa GO terms from Neighborhoods |
| CC | GO:0030117 | membrane coat | IEP | Lactuca Sativa GO terms from Neighborhoods |
| MF | GO:0031267 | small GTPase binding | IEP | Lactuca Sativa GO terms from Neighborhoods |
| BP | GO:0032469 | endoplasmic reticulum calcium ion homeostasis | IEP | Lactuca Sativa GO terms from Neighborhoods |
| MF | GO:0032553 | ribonucleotide binding | IEP | Lactuca Sativa GO terms from Neighborhoods |
| MF | GO:0032555 | purine ribonucleotide binding | IEP | Lactuca Sativa GO terms from Neighborhoods |
| BP | GO:0033036 | macromolecule localization | IEP | Lactuca Sativa GO terms from Neighborhoods |
| MF | GO:0034062 | 5'-3' RNA polymerase activity | IEP | Lactuca Sativa GO terms from Neighborhoods |
| BP | GO:0034504 | protein localization to nucleus | IEP | Lactuca Sativa GO terms from Neighborhoods |
| BP | GO:0035303 | regulation of dephosphorylation | IEP | Lactuca Sativa GO terms from Neighborhoods |
| BP | GO:0035304 | regulation of protein dephosphorylation | IEP | Lactuca Sativa GO terms from Neighborhoods |
| MF | GO:0035639 | purine ribonucleoside triphosphate binding | IEP | Lactuca Sativa GO terms from Neighborhoods |
| MF | GO:0042393 | histone binding | IEP | Lactuca Sativa GO terms from Neighborhoods |
| BP | GO:0043666 | regulation of phosphoprotein phosphatase activity | IEP | Lactuca Sativa GO terms from Neighborhoods |
| BP | GO:0045184 | establishment of protein localization | IEP | Lactuca Sativa GO terms from Neighborhoods |
| BP | GO:0046907 | intracellular transport | IEP | Lactuca Sativa GO terms from Neighborhoods |
| BP | GO:0048193 | Golgi vesicle transport | IEP | Lactuca Sativa GO terms from Neighborhoods |
| MF | GO:0051020 | GTPase binding | IEP | Lactuca Sativa GO terms from Neighborhoods |
| BP | GO:0051169 | nuclear transport | IEP | Lactuca Sativa GO terms from Neighborhoods |
| BP | GO:0051170 | import into nucleus | IEP | Lactuca Sativa GO terms from Neighborhoods |
| BP | GO:0051179 | localization | IEP | Lactuca Sativa GO terms from Neighborhoods |
| BP | GO:0051234 | establishment of localization | IEP | Lactuca Sativa GO terms from Neighborhoods |
| BP | GO:0051336 | regulation of hydrolase activity | IEP | Lactuca Sativa GO terms from Neighborhoods |
| BP | GO:0051641 | cellular localization | IEP | Lactuca Sativa GO terms from Neighborhoods |
| BP | GO:0051649 | establishment of localization in cell | IEP | Lactuca Sativa GO terms from Neighborhoods |
| BP | GO:0055074 | calcium ion homeostasis | IEP | Lactuca Sativa GO terms from Neighborhoods |
| BP | GO:0070727 | cellular macromolecule localization | IEP | Lactuca Sativa GO terms from Neighborhoods |
| BP | GO:0071702 | organic substance transport | IEP | Lactuca Sativa GO terms from Neighborhoods |
| BP | GO:0071705 | nitrogen compound transport | IEP | Lactuca Sativa GO terms from Neighborhoods |
| MF | GO:0097159 | organic cyclic compound binding | IEP | Lactuca Sativa GO terms from Neighborhoods |
| MF | GO:0097367 | carbohydrate derivative binding | IEP | Lactuca Sativa GO terms from Neighborhoods |
| MF | GO:0097747 | RNA polymerase activity | IEP | Lactuca Sativa GO terms from Neighborhoods |
| MF | GO:0140097 | catalytic activity, acting on DNA | IEP | Lactuca Sativa GO terms from Neighborhoods |
| MF | GO:0140104 | molecular carrier activity | IEP | Lactuca Sativa GO terms from Neighborhoods |
| MF | GO:0140142 | nucleocytoplasmic carrier activity | IEP | Lactuca Sativa GO terms from Neighborhoods |
| MF | GO:0140640 | catalytic activity, acting on a nucleic acid | IEP | Lactuca Sativa GO terms from Neighborhoods |
| MF | GO:0140658 | ATP-dependent chromatin remodeler activity | IEP | Lactuca Sativa GO terms from Neighborhoods |
| MF | GO:1901363 | heterocyclic compound binding | IEP | Lactuca Sativa GO terms from Neighborhoods |
No InterPro domains available for this sequence
| No external refs found! |