Lsat_1_v5_gn_2_81160.1

Description : E3 ubiquitin ligase *(SINA)

Gene families : OG0018208 (OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)

Attention: This gene has low abundance.

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	Lactuca sativa (Lsa) PCC: Lsat_1_v5_gn_2_81160.1
Cluster	Lactuca sativa (Lsa) Coexpression Clusters (HCCA Algorithm): Cluster_45

Type	GO Term	Name	Evidence	Source
CC	GO:0005575	cellular_component	None	Extended
CC	GO:0005737	cytoplasm	IEA	Interproscan
BP	GO:0006508	proteolysis	None	Extended
BP	GO:0006511	ubiquitin-dependent protein catabolic process	IEA	Interproscan
BP	GO:0006807	nitrogen compound metabolic process	None	Extended
BP	GO:0007275	multicellular organism development	IEA	Interproscan
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
BP	GO:0009056	catabolic process	None	Extended
BP	GO:0009057	macromolecule catabolic process	None	Extended
BP	GO:0019538	protein metabolic process	None	Extended
BP	GO:0019941	modification-dependent protein catabolic process	None	Extended
BP	GO:0032501	multicellular organismal process	None	Extended
BP	GO:0032502	developmental process	None	Extended
BP	GO:0043170	macromolecule metabolic process	None	Extended
BP	GO:0043632	modification-dependent macromolecule catabolic process	None	Extended
BP	GO:0044238	primary metabolic process	None	Extended
BP	GO:0048856	anatomical structure development	None	Extended
BP	GO:0051603	proteolysis involved in protein catabolic process	None	Extended
BP	GO:0071704	organic substance metabolic process	None	Extended
CC	GO:0110165	cellular anatomical entity	None	Extended
BP	GO:1901564	organonitrogen compound metabolic process	None	Extended
BP	GO:1901575	organic substance catabolic process	None	Extended

Type	GO Term	Name	Evidence	Source
CC	GO:0000148	1,3-beta-D-glucan synthase complex	IEP	Lactuca Sativa GO terms from Neighborhoods
MF	GO:0003843	1,3-beta-D-glucan synthase activity	IEP	Lactuca Sativa GO terms from Neighborhoods
MF	GO:0003950	NAD+ ADP-ribosyltransferase activity	IEP	Lactuca Sativa GO terms from Neighborhoods
MF	GO:0004559	alpha-mannosidase activity	IEP	Lactuca Sativa GO terms from Neighborhoods
MF	GO:0004571	mannosyl-oligosaccharide 1,2-alpha-mannosidase activity	IEP	Lactuca Sativa GO terms from Neighborhoods
MF	GO:0005319	lipid transporter activity	IEP	Lactuca Sativa GO terms from Neighborhoods
BP	GO:0006074	(1->3)-beta-D-glucan metabolic process	IEP	Lactuca Sativa GO terms from Neighborhoods
BP	GO:0006075	(1->3)-beta-D-glucan biosynthetic process	IEP	Lactuca Sativa GO terms from Neighborhoods
BP	GO:0006869	lipid transport	IEP	Lactuca Sativa GO terms from Neighborhoods
MF	GO:0015923	mannosidase activity	IEP	Lactuca Sativa GO terms from Neighborhoods
MF	GO:0015924	mannosyl-oligosaccharide mannosidase activity	IEP	Lactuca Sativa GO terms from Neighborhoods
MF	GO:0016763	pentosyltransferase activity	IEP	Lactuca Sativa GO terms from Neighborhoods
BP	GO:0061024	membrane organization	IEP	Lactuca Sativa GO terms from Neighborhoods
BP	GO:0120009	intermembrane lipid transfer	IEP	Lactuca Sativa GO terms from Neighborhoods
MF	GO:0120013	lipid transfer activity	IEP	Lactuca Sativa GO terms from Neighborhoods

InterPro domains	Description	Start	Stop
IPR018121	7-in-absentia-prot_TRAF-dom	202	351

External Links

No external refs found!