- Species
- Tools
- Expression Profiles
- Compare profiles
- Create heatmap
- Export expression levels
- Expression Specificity
- Compare specificities
- Find specific profiles
- Co-expression Networks
- Create custom network
- Find enriched clusters
- Search
Aliases : DEG24, RBCS2B
Description : small subunit of ribulose-1,5-bisphosphat carboxylase/oxygenase heterodimer
Gene families : OG0001330 (OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol) Phylogenetic Tree(s): OG0001330_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | Lactuca sativa (Lsa) PCC: Lsat_1_v5_gn_2_79600.1 | |
| Cluster | Lactuca sativa (Lsa) Coexpression Clusters (HCCA Algorithm): Cluster_159 |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No GO annotation available for this sequence |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0003755 | peptidyl-prolyl cis-trans isomerase activity | IEP | Lactuca Sativa GO terms from Neighborhoods |
| MF | GO:0004356 | glutamine synthetase activity | IEP | Lactuca Sativa GO terms from Neighborhoods |
| MF | GO:0004618 | phosphoglycerate kinase activity | IEP | Lactuca Sativa GO terms from Neighborhoods |
| MF | GO:0004751 | ribose-5-phosphate isomerase activity | IEP | Lactuca Sativa GO terms from Neighborhoods |
| MF | GO:0005261 | monoatomic cation channel activity | IEP | Lactuca Sativa GO terms from Neighborhoods |
| MF | GO:0005509 | calcium ion binding | IEP | Lactuca Sativa GO terms from Neighborhoods |
| CC | GO:0005575 | cellular_component | IEP | Lactuca Sativa GO terms from Neighborhoods |
| CC | GO:0005840 | ribosome | IEP | Lactuca Sativa GO terms from Neighborhoods |
| BP | GO:0006091 | generation of precursor metabolites and energy | IEP | Lactuca Sativa GO terms from Neighborhoods |
| BP | GO:0006163 | purine nucleotide metabolic process | IEP | Lactuca Sativa GO terms from Neighborhoods |
| BP | GO:0006164 | purine nucleotide biosynthetic process | IEP | Lactuca Sativa GO terms from Neighborhoods |
| BP | GO:0006541 | glutamine metabolic process | IEP | Lactuca Sativa GO terms from Neighborhoods |
| BP | GO:0006542 | glutamine biosynthetic process | IEP | Lactuca Sativa GO terms from Neighborhoods |
| BP | GO:0006753 | nucleoside phosphate metabolic process | IEP | Lactuca Sativa GO terms from Neighborhoods |
| BP | GO:0006754 | ATP biosynthetic process | IEP | Lactuca Sativa GO terms from Neighborhoods |
| BP | GO:0006778 | porphyrin-containing compound metabolic process | IEP | Lactuca Sativa GO terms from Neighborhoods |
| BP | GO:0006779 | porphyrin-containing compound biosynthetic process | IEP | Lactuca Sativa GO terms from Neighborhoods |
| BP | GO:0006979 | response to oxidative stress | IEP | Lactuca Sativa GO terms from Neighborhoods |
| MF | GO:0008942 | nitrite reductase [NAD(P)H] activity | IEP | Lactuca Sativa GO terms from Neighborhoods |
| BP | GO:0009052 | pentose-phosphate shunt, non-oxidative branch | IEP | Lactuca Sativa GO terms from Neighborhoods |
| BP | GO:0009058 | biosynthetic process | IEP | Lactuca Sativa GO terms from Neighborhoods |
| BP | GO:0009064 | glutamine family amino acid metabolic process | IEP | Lactuca Sativa GO terms from Neighborhoods |
| BP | GO:0009084 | glutamine family amino acid biosynthetic process | IEP | Lactuca Sativa GO terms from Neighborhoods |
| BP | GO:0009117 | nucleotide metabolic process | IEP | Lactuca Sativa GO terms from Neighborhoods |
| BP | GO:0009141 | nucleoside triphosphate metabolic process | IEP | Lactuca Sativa GO terms from Neighborhoods |
| BP | GO:0009142 | nucleoside triphosphate biosynthetic process | IEP | Lactuca Sativa GO terms from Neighborhoods |
| BP | GO:0009144 | purine nucleoside triphosphate metabolic process | IEP | Lactuca Sativa GO terms from Neighborhoods |
| BP | GO:0009145 | purine nucleoside triphosphate biosynthetic process | IEP | Lactuca Sativa GO terms from Neighborhoods |
| BP | GO:0009150 | purine ribonucleotide metabolic process | IEP | Lactuca Sativa GO terms from Neighborhoods |
| BP | GO:0009152 | purine ribonucleotide biosynthetic process | IEP | Lactuca Sativa GO terms from Neighborhoods |
| BP | GO:0009165 | nucleotide biosynthetic process | IEP | Lactuca Sativa GO terms from Neighborhoods |
| BP | GO:0009199 | ribonucleoside triphosphate metabolic process | IEP | Lactuca Sativa GO terms from Neighborhoods |
| BP | GO:0009201 | ribonucleoside triphosphate biosynthetic process | IEP | Lactuca Sativa GO terms from Neighborhoods |
| BP | GO:0009205 | purine ribonucleoside triphosphate metabolic process | IEP | Lactuca Sativa GO terms from Neighborhoods |
| BP | GO:0009206 | purine ribonucleoside triphosphate biosynthetic process | IEP | Lactuca Sativa GO terms from Neighborhoods |
| BP | GO:0009259 | ribonucleotide metabolic process | IEP | Lactuca Sativa GO terms from Neighborhoods |
| BP | GO:0009260 | ribonucleotide biosynthetic process | IEP | Lactuca Sativa GO terms from Neighborhoods |
| CC | GO:0009512 | cytochrome b6f complex | IEP | Lactuca Sativa GO terms from Neighborhoods |
| CC | GO:0009521 | photosystem | IEP | Lactuca Sativa GO terms from Neighborhoods |
| CC | GO:0009523 | photosystem II | IEP | Lactuca Sativa GO terms from Neighborhoods |
| CC | GO:0009654 | photosystem II oxygen evolving complex | IEP | Lactuca Sativa GO terms from Neighborhoods |
| BP | GO:0010109 | regulation of photosynthesis | IEP | Lactuca Sativa GO terms from Neighborhoods |
| BP | GO:0010206 | photosystem II repair | IEP | Lactuca Sativa GO terms from Neighborhoods |
| BP | GO:0010207 | photosystem II assembly | IEP | Lactuca Sativa GO terms from Neighborhoods |
| MF | GO:0010242 | oxygen evolving activity | IEP | Lactuca Sativa GO terms from Neighborhoods |
| MF | GO:0015078 | proton transmembrane transporter activity | IEP | Lactuca Sativa GO terms from Neighborhoods |
| MF | GO:0015252 | proton channel activity | IEP | Lactuca Sativa GO terms from Neighborhoods |
| BP | GO:0015979 | photosynthesis | IEP | Lactuca Sativa GO terms from Neighborhoods |
| BP | GO:0015986 | proton motive force-driven ATP synthesis | IEP | Lactuca Sativa GO terms from Neighborhoods |
| BP | GO:0015994 | chlorophyll metabolic process | IEP | Lactuca Sativa GO terms from Neighborhoods |
| BP | GO:0015995 | chlorophyll biosynthetic process | IEP | Lactuca Sativa GO terms from Neighborhoods |
| BP | GO:0016043 | cellular component organization | IEP | Lactuca Sativa GO terms from Neighborhoods |
| MF | GO:0016209 | antioxidant activity | IEP | Lactuca Sativa GO terms from Neighborhoods |
| MF | GO:0016211 | ammonia ligase activity | IEP | Lactuca Sativa GO terms from Neighborhoods |
| MF | GO:0016491 | oxidoreductase activity | IEP | Lactuca Sativa GO terms from Neighborhoods |
| MF | GO:0016620 | oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor | IEP | Lactuca Sativa GO terms from Neighborhoods |
| MF | GO:0016661 | oxidoreductase activity, acting on other nitrogenous compounds as donors | IEP | Lactuca Sativa GO terms from Neighborhoods |
| MF | GO:0016774 | phosphotransferase activity, carboxyl group as acceptor | IEP | Lactuca Sativa GO terms from Neighborhoods |
| MF | GO:0016853 | isomerase activity | IEP | Lactuca Sativa GO terms from Neighborhoods |
| MF | GO:0016859 | cis-trans isomerase activity | IEP | Lactuca Sativa GO terms from Neighborhoods |
| MF | GO:0016868 | intramolecular transferase activity, phosphotransferases | IEP | Lactuca Sativa GO terms from Neighborhoods |
| MF | GO:0016880 | acid-ammonia (or amide) ligase activity | IEP | Lactuca Sativa GO terms from Neighborhoods |
| MF | GO:0016903 | oxidoreductase activity, acting on the aldehyde or oxo group of donors | IEP | Lactuca Sativa GO terms from Neighborhoods |
| BP | GO:0019693 | ribose phosphate metabolic process | IEP | Lactuca Sativa GO terms from Neighborhoods |
| CC | GO:0019898 | extrinsic component of membrane | IEP | Lactuca Sativa GO terms from Neighborhoods |
| BP | GO:0022607 | cellular component assembly | IEP | Lactuca Sativa GO terms from Neighborhoods |
| BP | GO:0030091 | protein repair | IEP | Lactuca Sativa GO terms from Neighborhoods |
| CC | GO:0032991 | protein-containing complex | IEP | Lactuca Sativa GO terms from Neighborhoods |
| BP | GO:0042440 | pigment metabolic process | IEP | Lactuca Sativa GO terms from Neighborhoods |
| BP | GO:0042548 | regulation of photosynthesis, light reaction | IEP | Lactuca Sativa GO terms from Neighborhoods |
| BP | GO:0042549 | photosystem II stabilization | IEP | Lactuca Sativa GO terms from Neighborhoods |
| CC | GO:0043228 | non-membrane-bounded organelle | IEP | Lactuca Sativa GO terms from Neighborhoods |
| CC | GO:0043232 | intracellular non-membrane-bounded organelle | IEP | Lactuca Sativa GO terms from Neighborhoods |
| BP | GO:0043467 | regulation of generation of precursor metabolites and energy | IEP | Lactuca Sativa GO terms from Neighborhoods |
| BP | GO:0043933 | protein-containing complex organization | IEP | Lactuca Sativa GO terms from Neighborhoods |
| BP | GO:0044249 | cellular biosynthetic process | IEP | Lactuca Sativa GO terms from Neighborhoods |
| BP | GO:0044271 | cellular nitrogen compound biosynthetic process | IEP | Lactuca Sativa GO terms from Neighborhoods |
| CC | GO:0045263 | proton-transporting ATP synthase complex, coupling factor F(o) | IEP | Lactuca Sativa GO terms from Neighborhoods |
| BP | GO:0046034 | ATP metabolic process | IEP | Lactuca Sativa GO terms from Neighborhoods |
| BP | GO:0046148 | pigment biosynthetic process | IEP | Lactuca Sativa GO terms from Neighborhoods |
| BP | GO:0046390 | ribose phosphate biosynthetic process | IEP | Lactuca Sativa GO terms from Neighborhoods |
| MF | GO:0046406 | magnesium protoporphyrin IX methyltransferase activity | IEP | Lactuca Sativa GO terms from Neighborhoods |
| MF | GO:0046857 | oxidoreductase activity, acting on other nitrogenous compounds as donors, with NAD or NADP as acceptor | IEP | Lactuca Sativa GO terms from Neighborhoods |
| MF | GO:0046933 | proton-transporting ATP synthase activity, rotational mechanism | IEP | Lactuca Sativa GO terms from Neighborhoods |
| MF | GO:0051287 | NAD binding | IEP | Lactuca Sativa GO terms from Neighborhoods |
| MF | GO:0051536 | iron-sulfur cluster binding | IEP | Lactuca Sativa GO terms from Neighborhoods |
| MF | GO:0051540 | metal cluster binding | IEP | Lactuca Sativa GO terms from Neighborhoods |
| BP | GO:0065003 | protein-containing complex assembly | IEP | Lactuca Sativa GO terms from Neighborhoods |
| CC | GO:0070069 | cytochrome complex | IEP | Lactuca Sativa GO terms from Neighborhoods |
| BP | GO:0072521 | purine-containing compound metabolic process | IEP | Lactuca Sativa GO terms from Neighborhoods |
| BP | GO:0072522 | purine-containing compound biosynthetic process | IEP | Lactuca Sativa GO terms from Neighborhoods |
| CC | GO:0098796 | membrane protein complex | IEP | Lactuca Sativa GO terms from Neighborhoods |
| MF | GO:0098809 | nitrite reductase activity | IEP | Lactuca Sativa GO terms from Neighborhoods |
| BP | GO:1901137 | carbohydrate derivative biosynthetic process | IEP | Lactuca Sativa GO terms from Neighborhoods |
| BP | GO:1901293 | nucleoside phosphate biosynthetic process | IEP | Lactuca Sativa GO terms from Neighborhoods |
| BP | GO:1901566 | organonitrogen compound biosynthetic process | IEP | Lactuca Sativa GO terms from Neighborhoods |
| BP | GO:1901576 | organic substance biosynthetic process | IEP | Lactuca Sativa GO terms from Neighborhoods |
| CC | GO:1902494 | catalytic complex | IEP | Lactuca Sativa GO terms from Neighborhoods |
| CC | GO:1990204 | oxidoreductase complex | IEP | Lactuca Sativa GO terms from Neighborhoods |
| No external refs found! |