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  5. Lsat_1_v5_gn_2_75500.1

Lsat_1_v5_gn_2_75500.1 (ATL25, NIP2)


Aliases : ATL25, NIP2

Description : RING-H2-class ATL-subclass E3 ubiquitin ligase


Gene families : OG0007714 (OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Lactuca sativa (Lsa) PCC: Lsat_1_v5_gn_2_75500.1
Cluster Lactuca sativa (Lsa) Coexpression Clusters (HCCA Algorithm): Cluster_225


Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0000287 magnesium ion binding IEP Lactuca Sativa GO terms from Neighborhoods
MF GO:0010333 terpene synthase activity IEP Lactuca Sativa GO terms from Neighborhoods
MF GO:0015299 obsolete solute:proton antiporter activity IEP Lactuca Sativa GO terms from Neighborhoods
CC GO:0016020 membrane IEP Lactuca Sativa GO terms from Neighborhoods
MF GO:0016835 carbon-oxygen lyase activity IEP Lactuca Sativa GO terms from Neighborhoods
MF GO:0016838 carbon-oxygen lyase activity, acting on phosphates IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0055085 transmembrane transport IEP Lactuca Sativa GO terms from Neighborhoods
InterPro domains Description Start Stop
IPR001841 Znf_RING 194 236
IPR027367 Gly-zipper_YMGG 53 89
No external refs found!