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  5. Lsat_1_v5_gn_2_69500.1

Lsat_1_v5_gn_2_69500.1 (CRR28)


Aliases : CRR28

Description : not classified


Gene families : OG0044365 (OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Lactuca sativa (Lsa) PCC: Lsat_1_v5_gn_2_69500.1
Cluster Lactuca sativa (Lsa) Coexpression Clusters (HCCA Algorithm): Cluster_104


Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
CC GO:0000123 histone acetyltransferase complex IEP Lactuca Sativa GO terms from Neighborhoods
MF GO:0003676 nucleic acid binding IEP Lactuca Sativa GO terms from Neighborhoods
MF GO:0003690 double-stranded DNA binding IEP Lactuca Sativa GO terms from Neighborhoods
MF GO:0003697 single-stranded DNA binding IEP Lactuca Sativa GO terms from Neighborhoods
MF GO:0003723 RNA binding IEP Lactuca Sativa GO terms from Neighborhoods
MF GO:0005488 binding IEP Lactuca Sativa GO terms from Neighborhoods
MF GO:0008270 zinc ion binding IEP Lactuca Sativa GO terms from Neighborhoods
CC GO:0031248 protein acetyltransferase complex IEP Lactuca Sativa GO terms from Neighborhoods
CC GO:0070461 SAGA-type complex IEP Lactuca Sativa GO terms from Neighborhoods
MF GO:0097159 organic cyclic compound binding IEP Lactuca Sativa GO terms from Neighborhoods
CC GO:0140535 intracellular protein-containing complex IEP Lactuca Sativa GO terms from Neighborhoods
MF GO:1901363 heterocyclic compound binding IEP Lactuca Sativa GO terms from Neighborhoods
CC GO:1902493 acetyltransferase complex IEP Lactuca Sativa GO terms from Neighborhoods
CC GO:1990234 transferase complex IEP Lactuca Sativa GO terms from Neighborhoods
InterPro domains Description Start Stop
IPR002885 Pentatricopeptide_rpt 93 142
IPR002885 Pentatricopeptide_rpt 299 346
IPR002885 Pentatricopeptide_rpt 198 225
IPR002885 Pentatricopeptide_rpt 170 195
IPR002885 Pentatricopeptide_rpt 374 399
IPR046848 E_motif 422 482
No external refs found!