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Aliases : HUB1, RDO4
Description : E3 ubiquitin ligase *(HUB)
Gene families : OG0010780 (OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol) Phylogenetic Tree(s): No tree available for this family
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | Brassica rapa (Bra) PCC: Bra004879 | |
| Cluster | Brassica rapa (Bra) Coexpression Clusters (HCCA Algorithm): Cluster_119 |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No GO annotation available for this sequence |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0000155 | phosphorelay sensor kinase activity | IEP | Brassica rapa GO terms from Neighborhoods |
| CC | GO:0000159 | protein phosphatase type 2A complex | IEP | Brassica rapa GO terms from Neighborhoods |
| MF | GO:0003682 | chromatin binding | IEP | Brassica rapa GO terms from Neighborhoods |
| MF | GO:0003774 | cytoskeletal motor activity | IEP | Brassica rapa GO terms from Neighborhoods |
| MF | GO:0004197 | cysteine-type endopeptidase activity | IEP | Brassica rapa GO terms from Neighborhoods |
| MF | GO:0004198 | calcium-dependent cysteine-type endopeptidase activity | IEP | Brassica rapa GO terms from Neighborhoods |
| MF | GO:0004402 | histone acetyltransferase activity | IEP | Brassica rapa GO terms from Neighborhoods |
| MF | GO:0004484 | mRNA guanylyltransferase activity | IEP | Brassica rapa GO terms from Neighborhoods |
| MF | GO:0004673 | protein histidine kinase activity | IEP | Brassica rapa GO terms from Neighborhoods |
| MF | GO:0004721 | phosphoprotein phosphatase activity | IEP | Brassica rapa GO terms from Neighborhoods |
| MF | GO:0005244 | voltage-gated monoatomic ion channel activity | IEP | Brassica rapa GO terms from Neighborhoods |
| MF | GO:0005247 | voltage-gated chloride channel activity | IEP | Brassica rapa GO terms from Neighborhoods |
| MF | GO:0005253 | monoatomic anion channel activity | IEP | Brassica rapa GO terms from Neighborhoods |
| MF | GO:0005254 | chloride channel activity | IEP | Brassica rapa GO terms from Neighborhoods |
| MF | GO:0005515 | protein binding | IEP | Brassica rapa GO terms from Neighborhoods |
| MF | GO:0005524 | ATP binding | IEP | Brassica rapa GO terms from Neighborhoods |
| CC | GO:0005669 | transcription factor TFIID complex | IEP | Brassica rapa GO terms from Neighborhoods |
| BP | GO:0006352 | DNA-templated transcription initiation | IEP | Brassica rapa GO terms from Neighborhoods |
| BP | GO:0006357 | regulation of transcription by RNA polymerase II | IEP | Brassica rapa GO terms from Neighborhoods |
| BP | GO:0006370 | 7-methylguanosine mRNA capping | IEP | Brassica rapa GO terms from Neighborhoods |
| BP | GO:0006473 | protein acetylation | IEP | Brassica rapa GO terms from Neighborhoods |
| BP | GO:0006475 | internal protein amino acid acetylation | IEP | Brassica rapa GO terms from Neighborhoods |
| BP | GO:0006820 | monoatomic anion transport | IEP | Brassica rapa GO terms from Neighborhoods |
| BP | GO:0006821 | chloride transport | IEP | Brassica rapa GO terms from Neighborhoods |
| BP | GO:0006914 | autophagy | IEP | Brassica rapa GO terms from Neighborhoods |
| MF | GO:0008080 | N-acetyltransferase activity | IEP | Brassica rapa GO terms from Neighborhoods |
| MF | GO:0008138 | protein tyrosine/serine/threonine phosphatase activity | IEP | Brassica rapa GO terms from Neighborhoods |
| MF | GO:0008192 | RNA guanylyltransferase activity | IEP | Brassica rapa GO terms from Neighborhoods |
| CC | GO:0008287 | protein serine/threonine phosphatase complex | IEP | Brassica rapa GO terms from Neighborhoods |
| MF | GO:0008308 | voltage-gated monoatomic anion channel activity | IEP | Brassica rapa GO terms from Neighborhoods |
| MF | GO:0008509 | monoatomic anion transmembrane transporter activity | IEP | Brassica rapa GO terms from Neighborhoods |
| MF | GO:0008519 | ammonium transmembrane transporter activity | IEP | Brassica rapa GO terms from Neighborhoods |
| BP | GO:0009452 | 7-methylguanosine RNA capping | IEP | Brassica rapa GO terms from Neighborhoods |
| MF | GO:0015108 | chloride transmembrane transporter activity | IEP | Brassica rapa GO terms from Neighborhoods |
| BP | GO:0016311 | dephosphorylation | IEP | Brassica rapa GO terms from Neighborhoods |
| MF | GO:0016410 | N-acyltransferase activity | IEP | Brassica rapa GO terms from Neighborhoods |
| CC | GO:0016459 | myosin complex | IEP | Brassica rapa GO terms from Neighborhoods |
| BP | GO:0016573 | histone acetylation | IEP | Brassica rapa GO terms from Neighborhoods |
| CC | GO:0016592 | mediator complex | IEP | Brassica rapa GO terms from Neighborhoods |
| MF | GO:0016775 | phosphotransferase activity, nitrogenous group as acceptor | IEP | Brassica rapa GO terms from Neighborhoods |
| MF | GO:0016854 | racemase and epimerase activity | IEP | Brassica rapa GO terms from Neighborhoods |
| MF | GO:0016855 | racemase and epimerase activity, acting on amino acids and derivatives | IEP | Brassica rapa GO terms from Neighborhoods |
| BP | GO:0018393 | internal peptidyl-lysine acetylation | IEP | Brassica rapa GO terms from Neighborhoods |
| BP | GO:0018394 | peptidyl-lysine acetylation | IEP | Brassica rapa GO terms from Neighborhoods |
| MF | GO:0022832 | voltage-gated channel activity | IEP | Brassica rapa GO terms from Neighborhoods |
| CC | GO:0030880 | RNA polymerase complex | IEP | Brassica rapa GO terms from Neighborhoods |
| MF | GO:0031625 | ubiquitin protein ligase binding | IEP | Brassica rapa GO terms from Neighborhoods |
| CC | GO:0032991 | protein-containing complex | IEP | Brassica rapa GO terms from Neighborhoods |
| MF | GO:0034212 | peptide N-acetyltransferase activity | IEP | Brassica rapa GO terms from Neighborhoods |
| MF | GO:0035639 | purine ribonucleoside triphosphate binding | IEP | Brassica rapa GO terms from Neighborhoods |
| BP | GO:0036260 | RNA capping | IEP | Brassica rapa GO terms from Neighborhoods |
| MF | GO:0036361 | racemase activity, acting on amino acids and derivatives | IEP | Brassica rapa GO terms from Neighborhoods |
| MF | GO:0042393 | histone binding | IEP | Brassica rapa GO terms from Neighborhoods |
| BP | GO:0043543 | protein acylation | IEP | Brassica rapa GO terms from Neighborhoods |
| MF | GO:0044389 | ubiquitin-like protein ligase binding | IEP | Brassica rapa GO terms from Neighborhoods |
| MF | GO:0044877 | protein-containing complex binding | IEP | Brassica rapa GO terms from Neighborhoods |
| CC | GO:0061695 | transferase complex, transferring phosphorus-containing groups | IEP | Brassica rapa GO terms from Neighborhoods |
| MF | GO:0061733 | peptide-lysine-N-acetyltransferase activity | IEP | Brassica rapa GO terms from Neighborhoods |
| BP | GO:0061919 | process utilizing autophagic mechanism | IEP | Brassica rapa GO terms from Neighborhoods |
| MF | GO:0070568 | guanylyltransferase activity | IEP | Brassica rapa GO terms from Neighborhoods |
| BP | GO:0072488 | ammonium transmembrane transport | IEP | Brassica rapa GO terms from Neighborhoods |
| MF | GO:0140299 | small molecule sensor activity | IEP | Brassica rapa GO terms from Neighborhoods |
| CC | GO:0140513 | nuclear protein-containing complex | IEP | Brassica rapa GO terms from Neighborhoods |
| MF | GO:0140993 | histone modifying activity | IEP | Brassica rapa GO terms from Neighborhoods |
| CC | GO:1902494 | catalytic complex | IEP | Brassica rapa GO terms from Neighborhoods |
| CC | GO:1902554 | serine/threonine protein kinase complex | IEP | Brassica rapa GO terms from Neighborhoods |
| CC | GO:1902911 | protein kinase complex | IEP | Brassica rapa GO terms from Neighborhoods |
| CC | GO:1903293 | phosphatase complex | IEP | Brassica rapa GO terms from Neighborhoods |
| CC | GO:1990234 | transferase complex | IEP | Brassica rapa GO terms from Neighborhoods |
| CC | GO:1990316 | Atg1/ULK1 kinase complex | IEP | Brassica rapa GO terms from Neighborhoods |
No InterPro domains available for this sequence
| No external refs found! |