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  5. Lsat_1_v5_gn_2_54280.1

Lsat_1_v5_gn_2_54280.1 (PIN5)


Aliases : PIN5

Description : auxin transporter *(PIN). auxin efflux transporter *(PIN)


Gene families : OG0043594 (OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Lactuca sativa (Lsa) PCC: Lsat_1_v5_gn_2_54280.1
Cluster Lactuca sativa (Lsa) Coexpression Clusters (HCCA Algorithm): Cluster_129


Type GO Term Name Evidence Source
CC GO:0016020 membrane IEA Interproscan
BP GO:0055085 transmembrane transport IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003968 RNA-dependent RNA polymerase activity IEP Lactuca Sativa GO terms from Neighborhoods
MF GO:0004556 alpha-amylase activity IEP Lactuca Sativa GO terms from Neighborhoods
MF GO:0004807 triose-phosphate isomerase activity IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0006720 isoprenoid metabolic process IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0006721 terpenoid metabolic process IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0006811 monoatomic ion transport IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0006812 monoatomic cation transport IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0006952 defense response IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0008299 isoprenoid biosynthetic process IEP Lactuca Sativa GO terms from Neighborhoods
MF GO:0015299 obsolete solute:proton antiporter activity IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0016114 terpenoid biosynthetic process IEP Lactuca Sativa GO terms from Neighborhoods
MF GO:0016160 amylase activity IEP Lactuca Sativa GO terms from Neighborhoods
MF GO:0016725 oxidoreductase activity, acting on CH or CH2 groups IEP Lactuca Sativa GO terms from Neighborhoods
MF GO:0016860 intramolecular oxidoreductase activity IEP Lactuca Sativa GO terms from Neighborhoods
MF GO:0016861 intramolecular oxidoreductase activity, interconverting aldoses and ketoses IEP Lactuca Sativa GO terms from Neighborhoods
MF GO:0033925 mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase activity IEP Lactuca Sativa GO terms from Neighborhoods
MF GO:0046429 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase activity IEP Lactuca Sativa GO terms from Neighborhoods
MF GO:0052592 oxidoreductase activity, acting on CH or CH2 groups, with an iron-sulfur protein as acceptor IEP Lactuca Sativa GO terms from Neighborhoods
InterPro domains Description Start Stop
IPR004776 Mem_transp_PIN-like 189 331
IPR004776 Mem_transp_PIN-like 10 158
No external refs found!