Lsat_1_v5_gn_2_43681.1 (ATCHS, CHS, TT4)


Aliases : ATCHS, CHS, TT4

Description : EC_2.3 acyltransferase. chalcone synthase


Gene families : OG0001778 (OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol) Phylogenetic Tree(s): OG0001778_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Lactuca sativa (Lsa) PCC: Lsat_1_v5_gn_2_43681.1
Cluster Lactuca sativa (Lsa) Coexpression Clusters (HCCA Algorithm): Cluster_158


Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source
BP GO:0000160 phosphorelay signal transduction system IEP Lactuca Sativa GO terms from Neighborhoods
MF GO:0005384 manganese ion transmembrane transporter activity IEP Lactuca Sativa GO terms from Neighborhoods
CC GO:0005576 extracellular region IEP Lactuca Sativa GO terms from Neighborhoods
CC GO:0005618 cell wall IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0006073 obsolete cellular glucan metabolic process IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0006873 intracellular monoatomic ion homeostasis IEP Lactuca Sativa GO terms from Neighborhoods
MF GO:0016762 xyloglucan:xyloglucosyl transferase activity IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0019725 cellular homeostasis IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0030003 intracellular monoatomic cation homeostasis IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0030026 intracellular manganese ion homeostasis IEP Lactuca Sativa GO terms from Neighborhoods
CC GO:0030312 external encapsulating structure IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0035556 intracellular signal transduction IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0042592 homeostatic process IEP Lactuca Sativa GO terms from Neighborhoods
MF GO:0046915 transition metal ion transmembrane transporter activity IEP Lactuca Sativa GO terms from Neighborhoods
CC GO:0048046 apoplast IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0048878 chemical homeostasis IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0050801 monoatomic ion homeostasis IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0055071 manganese ion homeostasis IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0055080 monoatomic cation homeostasis IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0055082 intracellular chemical homeostasis IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0098771 inorganic ion homeostasis IEP Lactuca Sativa GO terms from Neighborhoods
InterPro domains Description Start Stop
IPR012328 Chalcone/stilbene_synt_C 236 381
IPR001099 Chalcone/stilbene_synt_N 5 226
No external refs found!